RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 MYRIPQ8NFW9 859 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 TRIM58Q8NG06 486 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 OR52N2Q8NGI0 321 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 SLC5A11Q8WWX8 675 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 NEIL2Q969S2 332 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 MAGOHBQ96A72 148 aaKnown RBP8.15□□□□□ -1.1
CAPN3-208ENST00000397204 PYCR2Q96C36 320 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 LINGO1Q96FE5 620 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 OR4K3Q96R72 315 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 AIF1LQ9BQI0 150 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 CCDC77Q9BR77 488 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 DEFB127Q9H1M4 99 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 RHBGQ9H310 441 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 PELI2Q9HAT8 420 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 NECTIN3Q9NQS3 549 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 IARS2Q9NSE4 1012 aaKnown RBP8.15□□□□□ -1.1
CAPN3-208ENST00000397204 FBXW2Q9UKT8 454 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 MMACHCQ9Y4U1 282 aa8.15□□□□□ -1.1
CAPN3-208ENST00000397204 ZNF407Q9C0G0 2248 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 OR14I1A6ND48 311 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 GOLGA8MH3BSY2 632 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 GNB5O14775 395 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 BCKDKO14874 412 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 H2AFYO75367 372 aaKnown RBP8.14□□□□□ -1.11
CAPN3-208ENST00000397204 PDE9AO76083 593 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 MYO1DO94832 1006 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 TTC4O95801 387 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 EPB42P16452 691 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 PGAM1P18669 254 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 GABRB3P28472 473 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 CDC25BP30305 580 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 DNAJA1P31689 397 aaKnown RBP8.14□□□□□ -1.11
CAPN3-208ENST00000397204 ADH7P40394 386 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 HNF4AP41235 474 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 CDKN2DP55273 166 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 HSD17B7P56937 341 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 HYAL2Q12891 473 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 MYBPHQ13203 477 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 RBBP5Q15291 538 aaKnown RBP8.14□□□□□ -1.11
CAPN3-208ENST00000397204 NDUFAF5Q5TEU4 345 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 HECTD2Q5U5R9 776 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 NXPE4Q6UWF7 544 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 GALNT7Q86SF2 657 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 SLC22A16Q86VW1 577 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 CCDC71Q8IV32 467 aaPredicted RBP8.14□□□□□ -1.11
CAPN3-208ENST00000397204 AGGF1Q8N302 714 aaeCLIP8.14□□□□□ -1.11
CAPN3-208ENST00000397204 NAT8LQ8N9F0 302 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 ANKRD53Q8N9V6 530 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 PSD4Q8NDX1 1056 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 CHDHQ8NE62 594 aaPredicted RBP8.14□□□□□ -1.11
CAPN3-208ENST00000397204 CREB3L4Q8TEY5 395 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 VMP1Q96GC9 406 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 SEC16BQ96JE7 1060 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 FAR2Q96K12 515 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 NDNQ99608 321 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 FOXC2Q99958 501 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 NAT9Q9BTE0 207 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 NPLQ9BXD5 320 aaPredicted RBP8.14□□□□□ -1.11
CAPN3-208ENST00000397204 CXXC4Q9H2H0 198 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 KLHL31Q9H511 634 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 ZDHHC11Q9H8X9 412 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 KCMF1Q9P0J7 381 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 ERVK-11Q9UQG0 969 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 VWA7Q9Y334 891 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 KCNE2Q9Y6J6 123 aa8.14□□□□□ -1.11
CAPN3-208ENST00000397204 A0A1B0GVC2 190 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 FAM90A27PA6NNH2 459 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 A8MVJ9 347 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 FAM47E-STBD1D6RA91 191 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 NPIPA2E9PIF3 369 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 NPIPA3F8WFD2 350 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 ACOT7O00154 380 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 KLK8O60259 260 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 SUSD5O60279 629 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 ZWINTO95229 277 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 NADKO95544 446 aaPredicted RBP8.13□□□□□ -1.11
CAPN3-208ENST00000397204 IGHG3P01860 377 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 CCDC175P0C221 793 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 CNR1P21554 472 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 ACVR2AP27037 513 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 CXCR5P32302 372 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 ZFP36L2P47974 494 aaKnown RBP8.13□□□□□ -1.11
CAPN3-208ENST00000397204 IST1P53990 364 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 NUP107P57740 925 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 GPR85P60893 370 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 STXBP1P61764 594 aaKnown RBP8.13□□□□□ -1.11
CAPN3-208ENST00000397204 BTN3A2P78410 334 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 REEP5Q00765 189 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 PLGLB1Q02325 96 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 FOLH1Q04609 750 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 CRYMQ14894 314 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 KCTD19Q17RG1 926 aaPredicted RBP8.13□□□□□ -1.11
CAPN3-208ENST00000397204 RBM20Q5T481 1227 aaKnown RBP8.13□□□□□ -1.11
CAPN3-208ENST00000397204 TTC27Q6P3X3 843 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 IL20RBQ6UXL0 311 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 TMEM200AQ86VY9 491 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 THOC6Q86W42 341 aaKnown RBP8.13□□□□□ -1.11
CAPN3-208ENST00000397204 TREML1Q86YW5 311 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 CNTN4Q8IWV2 1026 aa8.13□□□□□ -1.11
CAPN3-208ENST00000397204 SCUBE1Q8IWY4 988 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms