RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 OR8K3Q8NH51 312 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 FZD3Q9NPG1 666 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 DKKL1Q9UK85 242 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 MANBAO00462 879 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 CLEC3AO75596 197 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 HS3ST5Q8IZT8 346 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 OR51G2Q8NGK0 314 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 TTTY10Q9BZA0 68 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 TAC3Q9UHF0 121 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 MRPS17Q9Y2R5 130 aaKnown RBP13.49□□□□□ -0.25
COL4A3-202ENST00000396578 PXDNQ92626 1479 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 AHSA1O95433 338 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 C6orf47O95873 294 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 EOMESO95936 686 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 CELP19835 753 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 SEMG2Q02383 582 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 CRHR2Q13324 411 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 SLC5A11Q8WWX8 675 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 ZNF317Q96PQ6 595 aaPredicted RBP13.49□□□□□ -0.25
COL4A3-202ENST00000396578 MAFBQ9Y5Q3 323 aaPredicted RBP13.49□□□□□ -0.25
COL4A3-202ENST00000396578 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.49□□□□□ -0.25
COL4A3-202ENST00000396578 ERCC1P07992 297 aaPredicted RBP13.49□□□□□ -0.25
COL4A3-202ENST00000396578 ATP4BP51164 291 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 CRISP1P54107 249 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 SELENOVP59797 346 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 RPS13P62277 151 aaKnown RBP13.49□□□□□ -0.25
COL4A3-202ENST00000396578 NAPRTQ6XQN6 538 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 CARM1Q86X55 608 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 PROKR1Q8TCW9 393 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 PLEKHO2Q8TD55 490 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 C14orf119Q9NWQ9 140 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 COPZ2Q9P299 210 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 GALPQ9UBC7 116 aa13.49□□□□□ -0.25
COL4A3-202ENST00000396578 PRSS51A0A1B0GVH4 220 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 OTOL1A6NHN0 477 aaPredicted RBP13.48□□□□□ -0.25
COL4A3-202ENST00000396578 IFNA17P01571 189 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 EBLN1P0CF75 366 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 PRKACGP22612 351 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 RORAP35398 523 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 DNAJB13P59910 316 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 LASP1Q14847 261 aaKnown RBP13.48□□□□□ -0.25
COL4A3-202ENST00000396578 SLC27A4Q6P1M0 643 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 CEACAM19Q7Z692 300 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 NPAS4Q8IUM7 802 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 CLEC4CQ8WTT0 213 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 NTAN1Q96AB6 310 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 GPR22Q99680 433 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 MAF1Q9H063 256 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 ACTL8Q9H568 366 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 LOC730098B7Z3J9 87 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 KCNJ5P48544 419 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 CLCNKAP51800 687 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 TLE3Q04726 772 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 ZNF763Q0D2J5 394 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 CHRNA6Q15825 494 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 SHQ1Q6PI26 577 aaKnown RBP13.48□□□□□ -0.25
COL4A3-202ENST00000396578 ARHGAP12Q8IWW6 846 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 SCML4Q8N228 414 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 DRAXINQ8NBI3 349 aaPredicted RBP13.48□□□□□ -0.25
COL4A3-202ENST00000396578 TCTEX1D2Q8WW35 142 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 TP63Q9H3D4 680 aaPredicted RBP13.48□□□□□ -0.25
COL4A3-202ENST00000396578 STUB1Q9UNE7 303 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 DLX3O60479 287 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 UQCRC2P22695 453 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 POU4F2Q12837 409 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 NKAPLQ5M9Q1 402 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 MBLAC2Q68D91 279 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 FAM198BQ6UWH4 519 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 GSG1LQ6UXU4 331 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 CD244Q9BZW8 370 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 PAK4O96013 591 aaPredicted RBP13.48□□□□□ -0.25
COL4A3-202ENST00000396578 OAS1P00973 400 aaKnown RBP13.48□□□□□ -0.25
COL4A3-202ENST00000396578 CTHP32929 405 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 MLLT10P55197 1068 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 GHRHRQ02643 423 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 MRPL49Q13405 166 aaKnown RBP13.48□□□□□ -0.25
COL4A3-202ENST00000396578 PCLAFQ15004 111 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 OR56A3Q8NH54 315 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 RBP7Q96R05 134 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 MROQ9BYG7 248 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 EPHA6Q9UF33 1036 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 HMX3A6NHT5 357 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 SOX1O00570 391 aaPredicted RBP13.48□□□□□ -0.25
COL4A3-202ENST00000396578 PDGFRLQ15198 375 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 NCBP2-AS2Q69YL0 99 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 TMIGD1Q6UXZ0 262 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 LYSMD3Q7Z3D4 306 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 OR9I1Q8NGQ6 314 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 OR6N2Q8NGY6 317 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 THAP4Q8WY91 577 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 DPCDQ9BVM2 203 aaPredicted RBP13.48□□□□□ -0.25
COL4A3-202ENST00000396578 NDRG2Q9UN36 371 aaKnown RBP13.48□□□□□ -0.25
COL4A3-202ENST00000396578 WDR45Q9Y484 360 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 LCHNA4D1U4 455 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 HOXB9P17482 250 aaPredicted RBP13.48□□□□□ -0.25
COL4A3-202ENST00000396578 VIPR1P32241 457 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 FLYWCH1Q4VC44 716 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 DCAF12L1Q5VU92 463 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 KANK2Q63ZY3 851 aa13.48□□□□□ -0.25
COL4A3-202ENST00000396578 TMEM156Q8N614 296 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms