RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 PSMD13Q9UNM6 376 aa16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 EIF3LQ9Y262 564 aaKnown RBP16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 PCDHB3Q9Y5E6 796 aa16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 PCDHGA6Q9Y5G7 932 aa16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 COLEC10Q9Y6Z7 277 aa16.63■□□□□ 0.25
TNFSF13-205ENST00000396545 NME4O00746 187 aa16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 CASQ2O14958 399 aaPredicted RBP16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 RSL1D1O76021 490 aaKnown RBP16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 PDYNP01213 254 aa16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 C8BP07358 591 aa16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 FURINP09958 794 aa16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 HSD17B1P14061 328 aa16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 SLC6A2P23975 617 aa16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 HNF4AP41235 474 aa16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 CASP2P42575 452 aa16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 RPL38P63173 70 aaKnown RBP16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 HMGCS1Q01581 520 aa16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 KIAA0040Q15053 153 aa16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 CPSF6Q16630 551 aaKnown RBP eCLIP16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 CYP2A13Q16696 494 aa16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 IMPG1Q17R60 797 aa16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 CCSMST1Q4G0I0 132 aa16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 PAGE3Q5JUK9 113 aa16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 C6orf10Q5SRN2 563 aa16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 PPP1R3BQ86XI6 285 aa16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 SLC15A3Q8IY34 581 aa16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 DPP10Q8N608 796 aa16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 FAM156AQ8NDB6 213 aa16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 VPS33AQ96AX1 596 aa16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 SLC41A2Q96JW4 573 aa16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 C12orf66Q96MD2 445 aa16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 HAUS8Q9BT25 410 aa16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 EHD1Q9H4M9 534 aa16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 INTS7Q9NVH2 962 aaKnown RBP16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 KCND3Q9UK17 655 aa16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 PCDHA9Q9Y5H5 950 aa16.62■□□□□ 0.25
TNFSF13-205ENST00000396545 IGHV5-51A0A0C4DH38 117 aa16.61■□□□□ 0.25
TNFSF13-205ENST00000396545 TIAF1O95411 115 aa16.61■□□□□ 0.25
TNFSF13-205ENST00000396545 ACPPP15309 386 aa16.61■□□□□ 0.25
TNFSF13-205ENST00000396545 ATP6V1C1P21283 382 aa16.61■□□□□ 0.25
TNFSF13-205ENST00000396545 IRF8Q02556 426 aa16.61■□□□□ 0.25
TNFSF13-205ENST00000396545 TAP2Q03519 686 aa16.61■□□□□ 0.25
TNFSF13-205ENST00000396545 NFYCQ13952 458 aa16.61■□□□□ 0.25
TNFSF13-205ENST00000396545 E2F2Q14209 437 aa16.61■□□□□ 0.25
TNFSF13-205ENST00000396545 ERV3-1Q14264 604 aa16.61■□□□□ 0.25
TNFSF13-205ENST00000396545 RPE65Q16518 533 aa16.61■□□□□ 0.25
TNFSF13-205ENST00000396545 MUM1Q2TAK8 710 aa16.61■□□□□ 0.25
TNFSF13-205ENST00000396545 LRRC56Q8IYG6 542 aaPredicted RBP16.61■□□□□ 0.25
TNFSF13-205ENST00000396545 OR5AR1Q8NGP9 310 aa16.61■□□□□ 0.25
TNFSF13-205ENST00000396545 DUS3LQ96G46 650 aaKnown RBP16.61■□□□□ 0.25
TNFSF13-205ENST00000396545 FERD3LQ96RJ6 166 aa16.61■□□□□ 0.25
TNFSF13-205ENST00000396545 INSM2Q96T92 566 aaPredicted RBP16.61■□□□□ 0.25
TNFSF13-205ENST00000396545 CCDC177Q9NQR7 707 aaPredicted RBP16.61■□□□□ 0.25
TNFSF13-205ENST00000396545 CMTM6Q9NX76 183 aa16.61■□□□□ 0.25
TNFSF13-205ENST00000396545 C6orf203Q9P0P8 240 aaPredicted RBP16.61■□□□□ 0.25
TNFSF13-205ENST00000396545 POLHQ9Y253 713 aa16.61■□□□□ 0.25
TNFSF13-205ENST00000396545 TP53TG5Q9Y2B4 290 aa16.61■□□□□ 0.25
TNFSF13-205ENST00000396545 DYRK1BQ9Y463 629 aa16.61■□□□□ 0.25
TNFSF13-205ENST00000396545 SPTAN1Q13813 2472 aaKnown RBP16.61■□□□□ 0.25
TNFSF13-205ENST00000396545 PRRC2CQ9Y520 2896 aaKnown RBP16.61■□□□□ 0.25
TNFSF13-205ENST00000396545 UTP20O75691 2785 aaKnown RBP16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 PRSS51A0A1B0GVH4 220 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 FOLR1P15328 257 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 TCN1P20061 433 aaPredicted RBP16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 VARSP26640 1264 aaKnown RBP16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 CHIT1Q13231 466 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 KRT33BQ14525 404 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 TIGD2Q4W5G0 525 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 SGO1Q5FBB7 561 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 TMEM126BQ8IUX1 230 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 KBTBD2Q8IY47 623 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 ZFPM2Q8WW38 1151 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 SELENOMQ8WWX9 145 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 SMPDL3AQ92484 453 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 TMEM125Q96AQ2 219 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 OR4K3Q96R72 315 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 PCDHAC1Q9H158 963 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 ELOVL6Q9H5J4 265 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 PDE7BQ9NP56 450 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 LHX9Q9NQ69 397 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 PADI1Q9ULC6 663 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 CLEC18AA5D8T8 446 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 K7EM74 188 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 CREG1O75629 220 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 RECKO95980 971 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 CCNYL3P0C7X3 344 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 MTHFD1P11586 935 aaKnown RBP16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 TBPL1P62380 186 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 MRPS22P82650 360 aaKnown RBP16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 KLRB1Q12918 225 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 LAPTM5Q13571 262 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 DNASE1L3Q13609 305 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 CAPRIN1Q14444 709 aaKnown RBP16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 IRAK1BP1Q5VVH5 260 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 FRG2Q64ET8 278 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 TCTN3Q6NUS6 607 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 KLHL35Q6PF15 583 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 LCTLQ6UWM7 567 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 CLEC18BQ6UXF7 455 aa16.6■□□□□ 0.25
TNFSF13-205ENST00000396545 PQLC1Q8N2U9 271 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms