RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 PIN1Q13526 163 aaPredicted RBP5.14□□□□□ -1.59
VPS41-203ENST00000395969 GPR50Q13585 617 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 HKDC1Q2TB90 917 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 SPIN4Q56A73 249 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 ZRANB3Q5FWF4 1079 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 C9orf50Q5SZB4 431 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 OTUD3Q5T2D3 398 aaPredicted RBP5.14□□□□□ -1.59
VPS41-203ENST00000395969 ZNF691Q5VV52 312 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 PTRHD1Q6GMV3 140 aaKnown RBP5.14□□□□□ -1.59
VPS41-203ENST00000395969 SLCO4C1Q6ZQN7 724 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 HID1Q8IV36 788 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 ZNF547Q8IVP9 402 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 CCDC103Q8IW40 242 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 GJD3Q8N144 294 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 CARFQ8N187 725 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 CCNYL1Q8N7R7 359 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 HOXB13Q92826 284 aaPredicted RBP5.14□□□□□ -1.59
VPS41-203ENST00000395969 UBE2E3Q969T4 207 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 NCLNQ969V3 563 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 TMBIM1Q969X1 311 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 BIRC7Q96CA5 298 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 LGALS12Q96DT0 336 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 NUS1Q96E22 293 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 EFCAB11Q9BUY7 163 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 BOCQ9BWV1 1114 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 KIR3DX1Q9H7L2 352 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 EVA1AQ9H8M9 152 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 SERHLQ9NQF3 203 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 DIABLOQ9NR28 239 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 CRLS1Q9UJA2 301 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.14□□□□□ -1.59
VPS41-203ENST00000395969 GRIP1Q9Y3R0 1128 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 V9GYQ6 96 aa5.14□□□□□ -1.59
VPS41-203ENST00000395969 TP53BP1Q12888 1972 aaPredicted RBP5.14□□□□□ -1.59
VPS41-203ENST00000395969 ARRDC5A6NEK1 342 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 OTOL1A6NHN0 477 aaPredicted RBP5.13□□□□□ -1.59
VPS41-203ENST00000395969 CCDC154A6NI56 674 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 PDZK1P1A8MUH7 402 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 hCG_2039718K7EN88 272 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 CAPN5O15484 640 aaPredicted RBP5.13□□□□□ -1.59
VPS41-203ENST00000395969 APBB3O95704 486 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 TP53P04637 393 aaPredicted RBP5.13□□□□□ -1.59
VPS41-203ENST00000395969 AMD1P17707 334 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 OR2B6P58173 313 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 ARHGEF7Q14155 803 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 CAPRIN1Q14444 709 aaKnown RBP5.13□□□□□ -1.59
VPS41-203ENST00000395969 ZIC1Q15915 447 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 PFKFB4Q16877 469 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 ZNF284Q2VY69 593 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 ZNF404Q494X3 552 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 RUNDC3AQ59EK9 446 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 ZC3H12BQ5HYM0 836 aaKnown RBP5.13□□□□□ -1.59
VPS41-203ENST00000395969 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.13□□□□□ -1.59
VPS41-203ENST00000395969 CES5AQ6NT32 575 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 FAM151BQ6UXP7 276 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 Q6ZVU0 165 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 ZNF438Q7Z4V0 828 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 EID3Q8N140 333 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 PARP16Q8N5Y8 322 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 OR4F6Q8NGB9 312 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 MCFD2Q8NI22 146 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 RORBQ92753 470 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 RPL10LQ96L21 214 aaKnown RBP5.13□□□□□ -1.59
VPS41-203ENST00000395969 GON7Q9BXV9 100 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 DUSP21Q9H596 190 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 MID1IP1Q9NPA3 183 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 LTB4R2Q9NPC1 389 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 PLSCR3Q9NRY6 295 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 DNAJC11Q9NVH1 559 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 C1orf109Q9NX04 203 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 FAM120CQ9NX05 1096 aaKnown RBP5.13□□□□□ -1.59
VPS41-203ENST00000395969 WNT6Q9Y6F9 365 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 TEX51A0A1B0GUA7 166 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 PRR23AA6NEV1 266 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 NEMP2A6NFY4 417 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 E5RI56 91 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 NR5A2O00482 541 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 TSPAN4O14817 238 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 SLC16A6O15403 523 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 MRPS14O60783 128 aaKnown RBP5.13□□□□□ -1.59
VPS41-203ENST00000395969 SLC22A3O75751 556 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 KLHL18O94889 574 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 RPN2P04844 631 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 APODP05090 189 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 PRSS56P0CW18 603 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 NCK1P16333 377 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 CTPS1P17812 591 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 GPX2P18283 190 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 CHRM3P20309 590 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 PPIBP23284 216 aaKnown RBP5.13□□□□□ -1.59
VPS41-203ENST00000395969 S100A5P33763 92 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 PTGS2P35354 604 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 ASMTP46597 345 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 PGGT1BP53609 377 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 FOXA1P55317 472 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 ST8SIA6P61647 398 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 SLC35A2P78381 396 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 ABATP80404 500 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 REEP5Q00765 189 aa5.13□□□□□ -1.59
VPS41-203ENST00000395969 TMEM115Q12893 351 aaPredicted RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms