RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 SCUBE1Q8IWY4 988 aa19.35■□□□□ 0.69
VCPKMT-202ENST00000395860 IRF2BPLQ9H1B7 796 aa19.35■□□□□ 0.69
VCPKMT-202ENST00000395860 ANKHQ9HCJ1 492 aa19.35■□□□□ 0.69
VCPKMT-202ENST00000395860 FAM86C1Q9NVL1 165 aa19.35■□□□□ 0.69
VCPKMT-202ENST00000395860 PDP2Q9P2J9 529 aa19.35■□□□□ 0.69
VCPKMT-202ENST00000395860 MAN2B2Q9Y2E5 1009 aa19.35■□□□□ 0.69
VCPKMT-202ENST00000395860 NAALAD2Q9Y3Q0 740 aa19.35■□□□□ 0.69
VCPKMT-202ENST00000395860 ATG4BQ9Y4P1 393 aa19.35■□□□□ 0.69
VCPKMT-202ENST00000395860 DMDP11532 3685 aa19.35■□□□□ 0.69
VCPKMT-202ENST00000395860 TMEM150CB9EJG8 249 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 FXYD1O00168 92 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 GALR3O60755 368 aaPredicted RBP19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 ANKRD34CP0C6C1 535 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 COL9A2Q14055 689 aaPredicted RBP19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 CSRP2Q16527 193 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 DLEU7Q6UYE1 221 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 PRSS41Q7RTY9 318 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 ULK2Q8IYT8 1036 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 DNAJB8Q8NHS0 232 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 MAPKAP1Q9BPZ7 522 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 GPATCH1Q9BRR8 931 aaKnown RBP19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 SPAG4Q9NPE6 437 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 ADA2Q9NZK5 511 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 MYO15AQ9UKN7 3530 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 IGHV5-10-1A0A0J9YXX1 117 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 PRSS51A0A1B0GVH4 220 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 A0A1W2PR48 441 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 HYKKA2RU49 373 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 TBX19O60806 448 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 SCN2BO60939 215 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 LMNAP02545 664 aaKnown RBP19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 GP1BAP07359 652 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 FOLR1P15328 257 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 GRM7Q14831 915 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 DNAJC14Q6Y2X3 702 aaPredicted RBP19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 ARHGAP22Q7Z5H3 698 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 NAXDQ8IW45 347 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 ARHGEF39Q8N4T4 335 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 TTC29Q8NA56 475 aaPredicted RBP19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 DNAJB14Q8TBM8 379 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 CCDC74BQ96LY2 380 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 INPP5KQ9BT40 448 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 SPRTNQ9H040 489 aaPredicted RBP19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 SERHLQ9NQF3 203 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 PHF11Q9UIL8 331 aa19.34■□□□□ 0.69
VCPKMT-202ENST00000395860 C1orf226A1L170 272 aa19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 ZNF860A6NHJ4 632 aa19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 RNASET2O00584 256 aaKnown RBP19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 RFXANKO14593 260 aa19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 PROM1O43490 865 aa19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 LRP3O75074 770 aa19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 ERN1O75460 977 aaKnown RBP19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 OR2B3O76000 313 aa19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 ANP32DO95626 131 aa19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 EFNA1P20827 205 aaPredicted RBP19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 SKP1P63208 163 aa19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 OLR1P78380 273 aa19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 LRRC74AQ0VAA2 488 aa19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 RUNX2Q13950 521 aa19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 MUM1Q2TAK8 710 aa19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 GARNL3Q5VVW2 1013 aa19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 PDSS2Q86YH6 399 aa19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 CLECL1Q8IZS7 167 aa19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 CIDECQ96AQ7 238 aaPredicted RBP19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 MIEF2Q96C03 454 aa19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 PANX1Q96RD7 426 aa19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 CGREF1Q99674 301 aa19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 FANCEQ9HB96 536 aa19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 EHD3Q9NZN3 535 aa19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 C5AR2Q9P296 337 aa19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 BTNL2Q9UIR0 455 aa19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 DAPP1Q9UN19 280 aa19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 PCDHA9Q9Y5H5 950 aa19.33■□□□□ 0.68
VCPKMT-202ENST00000395860 A0A096LPI6 279 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 NTN3O00634 580 aaPredicted RBP19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 PRKRAO75569 313 aaKnown RBP19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 PDE5AO76074 875 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 CPSF4O95639 269 aaKnown RBP19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 AIFM1O95831 613 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 MSL3P1P0C860 447 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 CPN2P22792 545 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 BUD31P41223 144 aaPredicted RBP19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 SLC7A2P52569 658 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 LIM2P55344 173 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 SPIDRQ14159 915 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 PRSS53Q2L4Q9 553 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 AASDHQ4L235 1098 aaPredicted RBP19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 C18orf63Q68DL7 685 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 FBXW8Q8N3Y1 598 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 NATD1Q8N6N6 113 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 FAM47BQ8NA70 645 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 RCBTB1Q8NDN9 531 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 EXOSC8Q96B26 276 aaKnown RBP19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 ZNF764Q96H86 408 aaPredicted RBP19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 C10orf90Q96M02 699 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 PAIP1Q9H074 479 aaKnown RBP19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 VAPAQ9P0L0 249 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 PACSIN3Q9UKS6 424 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 FRYLO94915 3013 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms