RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 ZIM2Q9NZV7 527 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 DLGAP4Q9Y2H0 992 aa8.04□□□□□ -1.12
HERC4-203ENST00000395185 FITM1A5D6W6 292 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 ANKDD1BA6NHY2 528 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 C9J4A7 227 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 H0YGG7 62 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 MEN1O00255 615 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 PLPP1O14494 284 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 PRMT3O60678 531 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 SEC22BO75396 215 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 DLGAP3O95886 979 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 RECKO95980 971 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 TGFB1P01137 390 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 PIM1P11309 404 aaPredicted RBP8.03□□□□□ -1.12
HERC4-203ENST00000395185 G6PDP11413 515 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 PRPS2P11908 318 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 PCNAP12004 261 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 JAK1P23458 1154 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 TACR1P25103 407 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 TPP2P29144 1249 aaPredicted RBP8.03□□□□□ -1.12
HERC4-203ENST00000395185 IL12AP29459 219 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 ARL1P40616 181 aaPredicted RBP8.03□□□□□ -1.12
HERC4-203ENST00000395185 STAT5AP42229 794 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 TSFMP43897 325 aaKnown RBP8.03□□□□□ -1.12
HERC4-203ENST00000395185 ARSFP54793 590 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 ARF3P61204 181 aaPredicted RBP8.03□□□□□ -1.12
HERC4-203ENST00000395185 SNRPNP63162 240 aaKnown RBP8.03□□□□□ -1.12
HERC4-203ENST00000395185 MAD2L1Q13257 205 aaPredicted RBP8.03□□□□□ -1.12
HERC4-203ENST00000395185 UBAP2LQ14157 1087 aaKnown RBP8.03□□□□□ -1.12
HERC4-203ENST00000395185 SQLEQ14534 574 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 NR6A1Q15406 480 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 ZSCAN26Q16670 478 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 FAM214AQ32MH5 1076 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 SPIN4Q56A73 249 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 TCTE1Q5JU00 501 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 YOD1Q5VVQ6 348 aaPredicted RBP8.03□□□□□ -1.12
HERC4-203ENST00000395185 DESI1Q6ICB0 168 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 MRM1Q6IN84 353 aaKnown RBP8.03□□□□□ -1.12
HERC4-203ENST00000395185 NOXRED1Q6NXP6 359 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 ABHD17CQ6PCB6 329 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 TIPARPQ7Z3E1 657 aaKnown RBP8.03□□□□□ -1.12
HERC4-203ENST00000395185 ASPGQ86U10 573 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 TBC1D19Q8N5T2 526 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 PRR7Q8TB68 274 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 SLC13A3Q8WWT9 602 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 PMEPA1Q969W9 287 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 ZNF501Q96CX3 271 aaPredicted RBP8.03□□□□□ -1.12
HERC4-203ENST00000395185 ERP27Q96DN0 273 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 TEX37Q96LM6 180 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 LRFN5Q96NI6 719 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 F2RL3Q96RI0 385 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 ZFYVE21Q9BQ24 234 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 KLHL25Q9H0H3 589 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 KLHL31Q9H511 634 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 TXLNGQ9NUQ3 528 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 ARL8BQ9NVJ2 186 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 NOP53Q9NZM5 478 aaKnown RBP8.03□□□□□ -1.12
HERC4-203ENST00000395185 GPN3Q9UHW5 284 aaPredicted RBP8.03□□□□□ -1.12
HERC4-203ENST00000395185 CROTQ9UKG9 612 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 SLC12A4Q9UP95 1085 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 SRPK3Q9UPE1 567 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 EXO1Q9UQ84 846 aaKnown RBP8.03□□□□□ -1.12
HERC4-203ENST00000395185 RUVBL1Q9Y265 456 aaKnown RBP8.03□□□□□ -1.12
HERC4-203ENST00000395185 FARSAQ9Y285 508 aaKnown RBP8.03□□□□□ -1.12
HERC4-203ENST00000395185 SLC22A7Q9Y694 548 aa8.03□□□□□ -1.12
HERC4-203ENST00000395185 SNRNP200O75643 2136 aaKnown RBP8.03□□□□□ -1.12
HERC4-203ENST00000395185 A0A0A6YYD5 115 aa8.02□□□□□ -1.13
HERC4-203ENST00000395185 A0A0J9YVX5 310 aa8.02□□□□□ -1.13
HERC4-203ENST00000395185 LOC101059948A0A1B0GTJ6 334 aa8.02□□□□□ -1.13
HERC4-203ENST00000395185 C4orf51C9J302 202 aa8.02□□□□□ -1.13
HERC4-203ENST00000395185 PSMD12O00232 456 aaPredicted RBP8.02□□□□□ -1.13
HERC4-203ENST00000395185 TXNDC9O14530 226 aa8.02□□□□□ -1.13
HERC4-203ENST00000395185 P2RX6O15547 441 aa8.02□□□□□ -1.13
HERC4-203ENST00000395185 ZNF749O43361 778 aa8.02□□□□□ -1.13
HERC4-203ENST00000395185 TBX19O60806 448 aa8.02□□□□□ -1.13
HERC4-203ENST00000395185 UBOX5O94941 541 aa8.02□□□□□ -1.13
HERC4-203ENST00000395185 ZNF28P17035 718 aa8.02□□□□□ -1.13
HERC4-203ENST00000395185 SDC1P18827 310 aa8.02□□□□□ -1.13
HERC4-203ENST00000395185 NCF2P19878 526 aaPredicted RBP8.02□□□□□ -1.13
HERC4-203ENST00000395185 ALAS2P22557 587 aa8.02□□□□□ -1.13
HERC4-203ENST00000395185 PIK3R1P27986 724 aa8.02□□□□□ -1.13
HERC4-203ENST00000395185 TIA1P31483 386 aaKnown RBP eCLIP8.02□□□□□ -1.136e-6■■□□□ 11.4
HERC4-203ENST00000395185 HNRNPH1P31943 449 aaKnown RBP8.02□□□□□ -1.13
HERC4-203ENST00000395185 TRA2BP62995 288 aaKnown RBP8.02□□□□□ -1.13
HERC4-203ENST00000395185 PHEXP78562 749 aa8.02□□□□□ -1.13
HERC4-203ENST00000395185 DCDP81605 110 aaKnown RBP8.02□□□□□ -1.13
HERC4-203ENST00000395185 DDX39BQ13838 428 aaKnown RBP8.02□□□□□ -1.13
HERC4-203ENST00000395185 GRM7Q14831 915 aa8.02□□□□□ -1.13
HERC4-203ENST00000395185 TLR1Q15399 786 aa8.02□□□□□ -1.13
HERC4-203ENST00000395185 IMPG1Q17R60 797 aa8.02□□□□□ -1.13
HERC4-203ENST00000395185 SPRED3Q2MJR0 410 aa8.02□□□□□ -1.13
HERC4-203ENST00000395185 CRTC2Q53ET0 693 aaPredicted RBP8.02□□□□□ -1.13
HERC4-203ENST00000395185 NXNQ6DKJ4 435 aa8.02□□□□□ -1.13
HERC4-203ENST00000395185 FRMPD2BQ6IN97 320 aa8.02□□□□□ -1.13
HERC4-203ENST00000395185 TMEM214Q6NUQ4 689 aaKnown RBP8.02□□□□□ -1.13
HERC4-203ENST00000395185 BORAQ6PGQ7 559 aa8.02□□□□□ -1.13
HERC4-203ENST00000395185 PAOXQ6QHF9 649 aa8.02□□□□□ -1.13
HERC4-203ENST00000395185 CYP20A1Q6UW02 462 aa8.02□□□□□ -1.13
HERC4-203ENST00000395185 MED25Q71SY5 747 aa8.02□□□□□ -1.13
HERC4-203ENST00000395185 COMMD6Q7Z4G1 85 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms