RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 ABHD13Q7L211 337 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.2□□□□□ -1.1
TDP1-203ENST00000393454 C10orf111Q8N326 155 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 SLC25A45Q8N413 288 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 UTP15Q8TED0 518 aaKnown RBP8.2□□□□□ -1.1
TDP1-203ENST00000393454 NCSTNQ92542 709 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 SLCO4A1Q96BD0 722 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 TM4SF19Q96DZ7 209 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 AHCYL2Q96HN2 611 aaKnown RBP8.2□□□□□ -1.1
TDP1-203ENST00000393454 ELF4Q99607 663 aaPredicted RBP8.2□□□□□ -1.1
TDP1-203ENST00000393454 SEPHS2Q99611 448 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 PKP2Q99959 881 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 SLC35A5Q9BS91 424 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 RPF2Q9H7B2 306 aaKnown RBP8.2□□□□□ -1.1
TDP1-203ENST00000393454 UCK1Q9HA47 277 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 STARD5Q9NSY2 213 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 TAS2R9Q9NYW1 312 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 LRIT1Q9P2V4 623 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 SUSD2Q9UGT4 822 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 ATG4BQ9Y4P1 393 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 KLK4Q9Y5K2 254 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 ZDBF2Q9HCK1 2354 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 A0A1W2PR48 441 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 HRO43593 1189 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 PRKRAO75569 313 aaKnown RBP8.2□□□□□ -1.1
TDP1-203ENST00000393454 ERAL1O75616 437 aaKnown RBP8.2□□□□□ -1.1
TDP1-203ENST00000393454 TIPRLO75663 272 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 SCELO95171 688 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 C9P02748 559 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 CFIP05156 583 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 ZCCHC18P0CG32 403 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 CRATP43155 626 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 TSFMP43897 325 aaKnown RBP8.2□□□□□ -1.1
TDP1-203ENST00000393454 CASP9P55211 416 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 RELAQ04206 551 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 HSPB3Q12988 150 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 DEFB110Q30KQ9 67 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 SPDYE7PQ495Y7 208 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 DEFB134Q4QY38 66 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 C6orf132Q5T0Z8 1188 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.2□□□□□ -1.12e-6■■■■□ 26.1
TDP1-203ENST00000393454 RNF44Q7L0R7 432 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 C17orf82Q86X59 251 aaPredicted RBP8.2□□□□□ -1.1
TDP1-203ENST00000393454 CALHM3Q86XJ0 350 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 MAML2Q8IZL2 1156 aaPredicted RBP8.2□□□□□ -1.1
TDP1-203ENST00000393454 ZCCHC7Q8N3Z6 543 aaKnown RBP8.2□□□□□ -1.1
TDP1-203ENST00000393454 NATD1Q8N6N6 113 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 CSNK1A1LQ8N752 337 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 Q8N9G6 341 aaPredicted RBP8.2□□□□□ -1.1
TDP1-203ENST00000393454 C19orf47Q8N9M1 422 aaKnown RBP8.2□□□□□ -1.1
TDP1-203ENST00000393454 OR5AK3PQ8NH89 298 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 GOT1L1Q8NHS2 421 aaPredicted RBP8.2□□□□□ -1.1
TDP1-203ENST00000393454 ZFP90Q8TF47 636 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 REXO5Q96IC2 774 aaKnown RBP8.2□□□□□ -1.1
TDP1-203ENST00000393454 TGM7Q96PF1 710 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 TRAPPC9Q96Q05 1148 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 PHF12Q96QT6 1004 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 BBS4Q96RK4 519 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 MAP3K3Q99759 626 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 MAPKAP1Q9BPZ7 522 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 NLNQ9BYT8 704 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 ROGDIQ9GZN7 287 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 VCX3BQ9H321 246 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 FSCN3Q9NQT6 498 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 CCM2LQ9NUG4 571 aaPredicted RBP8.2□□□□□ -1.1
TDP1-203ENST00000393454 LYARQ9NX58 379 aaKnown RBP8.2□□□□□ -1.1
TDP1-203ENST00000393454 KLHL3Q9UH77 587 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 ANAPC2Q9UJX6 822 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 PILRBQ9UKJ0 227 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 UTS2RQ9UKP6 389 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 CORO2BQ9UQ03 480 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 ASB4Q9Y574 426 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 CSNK1G3Q9Y6M4 447 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 RNF215Q9Y6U7 377 aa8.2□□□□□ -1.1
TDP1-203ENST00000393454 VCANP13611 3396 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 BDP1A6H8Y1 2624 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 PI4KAP42356 2102 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 TCRBV5S2A0A599 114 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 C1orf226A1L170 272 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 WASHC1A8K0Z3 465 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 B3GALT2O43825 422 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 KIF1CO43896 1103 aaKnown RBP8.19□□□□□ -1.1
TDP1-203ENST00000393454 TPST1O60507 370 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 TBX19O60806 448 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 AIFM1O95831 613 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 GPIP06744 558 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 UMPSP11172 480 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 MYF5P13349 255 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 GPX2P18283 190 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 IL1RNP18510 177 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 ZNF10P21506 573 aaPredicted RBP8.19□□□□□ -1.1
TDP1-203ENST00000393454 PEX2P28328 305 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 GZMMP51124 257 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 OR1D5P58170 312 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 BNC1Q01954 994 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 FXNQ16595 210 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 GRAMD1BQ3KR37 738 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 AMZ1Q400G9 498 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 C18orf63Q68DL7 685 aa8.19□□□□□ -1.1
TDP1-203ENST00000393454 MRM1Q6IN84 353 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms