RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 EIF3GO75821 320 aaKnown RBP eCLIP7.34□□□□□ -1.23
VTI1A-201ENST00000393077 RGS11O94810 467 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 CPSF4O95639 269 aaKnown RBP7.34□□□□□ -1.23
VTI1A-201ENST00000393077 NFYAP23511 347 aaPredicted RBP7.34□□□□□ -1.23
VTI1A-201ENST00000393077 NOVP48745 357 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 TPI1P60174 286 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 PTPRCAPQ14761 206 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 MICAQ29983 383 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 ZACNQ401N2 412 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 CD276Q5ZPR3 534 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 MPZL3Q6UWV2 235 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 SHFQ7M4L6 423 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 NETO2Q8NC67 525 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 PXT1Q8NFP0 134 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 P2RY11Q96G91 374 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 HPDLQ96IR7 371 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 RPRD1AQ96P16 312 aaPredicted RBP7.34□□□□□ -1.23
VTI1A-201ENST00000393077 NT5C1AQ9BXI3 368 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 DDX31Q9H8H2 851 aaKnown RBP7.34□□□□□ -1.23
VTI1A-201ENST00000393077 MARK1Q9P0L2 795 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 AKAP7Q9P0M2 348 aaPredicted RBP7.34□□□□□ -1.23
VTI1A-201ENST00000393077 PCDHGA6Q9Y5G7 932 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 FAM74A7A6NL05 159 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 LACTBL1A8MY62 500 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 ALDH1A1P00352 501 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 STAG3L1P0CL83 205 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 SPP1P10451 314 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 GNALP38405 381 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 RPS19P39019 145 aaKnown RBP7.34□□□□□ -1.23
VTI1A-201ENST00000393077 MAGEA12P43365 314 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 AVPR1BP47901 424 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 CLDN20P56880 219 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 BTG1P62324 171 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 AP5B1Q2VPB7 878 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 FAM74A3Q4VXF1 159 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 COQ5Q5HYK3 327 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 KHDRBS2Q5VWX1 349 aaKnown RBP7.34□□□□□ -1.23
VTI1A-201ENST00000393077 RAET1GQ6H3X3 334 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 SLC9B2Q86UD5 537 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 LIX1LQ8IVB5 337 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 ZNF566Q969W8 418 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 NXPE3Q969Y0 559 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 TMEM41AQ96HV5 264 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 HS6ST2Q96MM7 605 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 MBOAT4Q96T53 435 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 ARHGAP39Q9C0H5 1083 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 PRDM9Q9NQV7 894 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 ZFP57Q9NU63 452 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 TEX10Q9NXF1 929 aaPredicted RBP7.34□□□□□ -1.23
VTI1A-201ENST00000393077 TINAGQ9UJW2 476 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 NDRG2Q9UN36 371 aaKnown RBP7.34□□□□□ -1.23
VTI1A-201ENST00000393077 MED16Q9Y2X0 877 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 SCAMP2O15127 329 aaKnown RBP7.33□□□□□ -1.24
VTI1A-201ENST00000393077 GREM1O60565 184 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 GATBO75879 557 aaKnown RBP7.33□□□□□ -1.24
VTI1A-201ENST00000393077 PTHP01270 115 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 ARSAP15289 507 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 GPX3P22352 226 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 CERS1P27544 350 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 SLC25A11Q02978 314 aaKnown RBP7.33□□□□□ -1.24
VTI1A-201ENST00000393077 EMX2Q04743 252 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 FABP9Q0Z7S8 132 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 HYAL2Q12891 473 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 ZNF234Q14588 700 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 TOR1AIP1Q5JTV8 583 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 CELF3Q5SZQ8 465 aaKnown RBP7.33□□□□□ -1.24
VTI1A-201ENST00000393077 RPL13AP3Q6NVV1 102 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 ABHD15Q6UXT9 468 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 ZNF621Q6ZSS3 439 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 GPR155Q7Z3F1 870 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 OR7G2Q8NG99 324 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 WDR20Q8TBZ3 569 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 CPNE2Q96FN4 548 aaPredicted RBP7.33□□□□□ -1.24
VTI1A-201ENST00000393077 GPR137Q96N19 417 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 GPR22Q99680 433 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 RHNO1Q9BSD3 238 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 SHARPINQ9H0F6 387 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 C1orf109Q9NX04 203 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 SLC6A14Q9UN76 642 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 USP22Q9UPT9 525 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 ERVW-1Q9UQF0 538 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 ASF1AQ9Y294 204 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 NUBP2Q9Y5Y2 271 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 MYO10Q9HD67 2058 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 A0A1W2PRQ8 180 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 STK25O00506 426 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 UBFD1O14562 309 aaKnown RBP7.33□□□□□ -1.24
VTI1A-201ENST00000393077 SCAMP1O15126 338 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 PMM2O15305 246 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 SUV39H1O43463 412 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 SEC22BO75396 215 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 EPOP01588 193 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 LGALS2P05162 132 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 HIST1H2AGP0C0S8 130 aaPredicted RBP7.33□□□□□ -1.24
VTI1A-201ENST00000393077 GGT1P19440 569 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 HIST1H2ADP20671 130 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 RFC3P40938 356 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 BEX3Q00994 111 aa7.33□□□□□ -1.24
VTI1A-201ENST00000393077 CACNB2Q08289 660 aaPredicted RBP7.33□□□□□ -1.24
VTI1A-201ENST00000393077 MAD2L1Q13257 205 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms