RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 EMC1Q8N766 993 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 SLC41A2Q96JW4 573 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 ZNF560Q96MR9 790 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 ANKRD27Q96NW4 1050 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 CASD1Q96PB1 797 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 SLC22A12Q96S37 553 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 NRTNQ99748 197 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 NRIP2Q9BQI9 281 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 C1QTNF1Q9BXJ1 281 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 CUEDC2Q9H467 287 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 FGF21Q9NSA1 209 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 FAM96BQ9Y3D0 163 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 CPAMD8Q8IZJ3 1885 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 IGKV2D-29A0A075B6S2 120 aaPredicted RBP-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 IGHV3-35A0A0C4DH35 117 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 IQCMA0A1B0GVH7 501 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 A0A1B0GWB2 263 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 SYNDIG1LA6NDD5 238 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 VGLL3A8MV65 326 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 GPAA1O43292 621 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 LRRTM2O43300 516 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 DNPH1O43598 174 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 TUSC2O75896 110 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 MT-CYBP00156 380 aaPredicted RBP-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 TGFAP01135 160 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 CISD3P0C7P0 127 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 CD1DP15813 335 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 ADRA2CP18825 462 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 CNGA1P29973 690 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 HNF1BP35680 557 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 MAGEA9P43362 315 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 CASP5P51878 434 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 RPS8P62241 208 aaKnown RBP-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 FAM193AP78312 1265 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 SIGLEC14Q08ET2 396 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 ZP4Q12836 540 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 ACKR1Q16570 336 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 BTBD16Q32M84 506 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 ZSCAN23Q3MJ62 389 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 CRY2Q49AN0 593 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 TMEM240Q5SV17 173 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 FAM120AOSQ5T036 256 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 Q5VV11 94 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 PRSS48Q7RTY5 328 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 GPAT4Q86UL3 456 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 SUGP1Q8IWZ8 645 aaKnown RBP-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 CCDC36Q8IYA8 594 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 ZCCHC7Q8N3Z6 543 aaKnown RBP-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 THAP8Q8NA92 274 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 MDS2Q8NDY4 140 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 OR13F1Q8NGS4 319 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 FNDC8Q8TC99 324 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 SPACA4Q8TDM5 124 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 N4BP2L2Q92802 583 aaPredicted RBP-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 MARC2Q969Z3 335 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 VPS33AQ96AX1 596 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 TIFAQ96CG3 184 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 SLC35E1Q96K37 410 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 PLEKHF1Q96S99 279 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 FEM1AQ9BSK4 669 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 NUP85Q9BW27 656 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 CAPS2Q9BXY5 557 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 NMNAT2Q9BZQ4 307 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 SIL1Q9H173 461 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 ST6GALNAC4Q9H4F1 302 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 IL1RAPQ9NPH3 570 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 G6PC2Q9NQR9 355 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 MRPL15Q9P015 296 aaKnown RBP-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 ZNF443Q9Y2A4 671 aaPredicted RBP-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 MAN2B2Q9Y2E5 1009 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 DGKBQ9Y6T7 804 aa-1.22□□□□□ -2.6
RNU6-540P-201ENST00000384622 IQSEC2Q5JU85 1478 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 BRCA2P51587 3418 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 CENPFP49454 3210 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 MAP2P11137 1827 aaKnown RBP-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 TSC2P49815 1807 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 A0A096LNJ9 63 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 OR2M5A3KFT3 312 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 ANKRD61A6NGH8 418 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 EFCAB8A8MWE9 144 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 CCL21O00585 134 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 SURF4O15260 269 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 DEFB4AO15263 64 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 RIPK2O43353 540 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 SGCEO43556 437 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 CHRM4P08173 479 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 RAB40ALP0C0E4 278 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 FGFR2P21802 821 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 KDELR1P24390 212 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 SPRP35270 261 aaPredicted RBP-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 PTGER4P35408 488 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 TRIM23P36406 574 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 TGFBR1P36897 503 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 SLC15A1P46059 708 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 GZMMP51124 257 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 ZNF83P51522 516 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 HNRNPFP52597 415 aaKnown RBP-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 NAGLUP54802 743 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 DIO3P55073 304 aa-1.23□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms