RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 GCKRQ14397 625 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 HEPACAMQ14CZ8 416 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 PDK1Q15118 436 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 PKN2Q16513 984 aaKnown RBP4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 CARTPTQ16568 116 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 C3AR1Q16581 482 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 MTHFSDQ2M296 383 aaKnown RBP4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 ZFP69Q49AA0 526 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 RFTN2Q52LD8 501 aaPredicted RBP4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 CT45A2Q5DJT8 189 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 Q6ZVQ6 151 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 KLHDC8BQ8IXV7 354 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 OR5M9Q8NGP3 310 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 GLYATL1Q969I3 302 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 GANQ9H2C0 597 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 KCNK13Q9HB14 408 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 MED17Q9NVC6 651 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 NLGN3Q9NZ94 848 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 KCNN3Q9UGI6 736 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 MRTO4Q9UKD2 239 aaKnown RBP4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 MYH15Q9Y2K3 1946 aa4.68□□□□□ -1.66
RNU6-40P-201ENST00000384254 ATP6AP2A0A1C7CYW4 349 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 MACROD2A1Z1Q3 448 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 PRR23AA6NEV1 266 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 CCDC69A6NI79 296 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 KRTAP29-1A8MX34 341 aaPredicted RBP4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 TMCO5BA8MYB1 307 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 LINC01565O15544 149 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 LRCH4O75427 683 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 STAM2O75886 525 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 PRKACGP22612 351 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 SFNP31947 248 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 ALDH3B1P43353 468 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 CCR4P51679 360 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 CNN1P51911 297 aaKnown RBP4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 STARD6P59095 220 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 SSTP61278 116 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 BTG1P62324 171 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 TRADDQ15628 312 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 TMEM30BQ3MIR4 351 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 TTC31Q49AM3 519 aaPredicted RBP4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 DLEU7Q6UYE1 221 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 USP43Q70EL4 1123 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 TAF8Q7Z7C8 310 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 DND1Q8IYX4 353 aaKnown RBP4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 TMEM185AQ8NFB2 350 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 OR9Q2Q8NGE9 314 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 OR6M1Q8NGM8 313 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 OR2T6Q8NHC8 308 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 KIAA1524Q8TCG1 905 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 S1PR3Q99500 378 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 CARD9Q9H257 536 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 ZNF696Q9H7X3 374 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 KCNMB3Q9NPA1 279 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 TEX10Q9NXF1 929 aaPredicted RBP4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 KLK11Q9UBX7 282 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 NARFQ9UHQ1 456 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 MRPS2Q9Y399 296 aaKnown RBP4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 PYGO1Q9Y3Y4 419 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 OR1A2Q9Y585 309 aa4.67□□□□□ -1.66
RNU6-40P-201ENST00000384254 DHX29Q7Z478 1369 aaKnown RBP4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 SPATA31D1Q6ZQQ2 1576 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 SERINC4A6NH21 518 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 LMO7DNF2Z398 122 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 CHEK1O14757 476 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 EDIL3O43854 480 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 SSX5O60225 188 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 CPNE6O95741 557 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 CLDN1O95832 211 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 IGKV3-20P01619 116 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 TPBGLP0DKB5 382 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 PCP11498 1178 aaKnown RBP4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 B4GALT1P15291 398 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 IL1RL1Q01638 556 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 KLHL22Q53GT1 634 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 DDI2Q5TDH0 399 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 PRAMEF7Q5VXH5 474 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 MFSD7Q6UXD7 560 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 KIF6Q6ZMV9 814 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 KDM8Q8N371 416 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 NUP37Q8NFH4 326 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 C8orf46Q8TAG6 207 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 GPR148Q8TDV2 347 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 RPGRIP1Q96KN7 1286 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 CXorf58Q96LI9 332 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 ASCL2Q99929 193 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 AGPAT1Q99943 283 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 RBM4Q9BWF3 364 aaKnown RBP4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 NUSAP1Q9BXS6 441 aaKnown RBP4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 KRT23Q9C075 422 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 HOMER3Q9NSC5 361 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 NDUFA13Q9P0J0 144 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 COPS7AQ9UBW8 275 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 BAIAP2L1Q9UHR4 511 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 GAB2Q9UQC2 676 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 NEDD4P46934 1319 aa4.66□□□□□ -1.66
RNU6-40P-201ENST00000384254 CFAP73A6NFT4 308 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 INPP4BO15327 924 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 P2RX6O15547 441 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms