RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 HGSNATQ68CP4 663 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 NIPAL1Q6NVV3 410 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 DUS1LQ6P1R4 473 aaKnown RBP5.66□□□□□ -1.5
RFX3-204ENST00000382004 CEACAM19Q7Z692 300 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 GOLM1Q8NBJ4 401 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 OR6C4Q8NGE1 309 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 C22orf15Q8WYQ4 148 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 KIAA1143Q96AT1 154 aaPredicted RBP5.66□□□□□ -1.5
RFX3-204ENST00000382004 KREMEN1Q96MU8 473 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 FRG2BQ96QU4 278 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 SLC32A1Q9H598 525 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 MYEF2Q9P2K5 600 aaKnown RBP5.66□□□□□ -1.5
RFX3-204ENST00000382004 ZNF223Q9UK11 482 aaPredicted RBP5.66□□□□□ -1.5
RFX3-204ENST00000382004 PADI3Q9ULW8 664 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 HCRTR2O43614 444 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 IL7P13232 177 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 NDUFS1P28331 727 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 CX3CR1P49238 355 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 FXYD4P59646 89 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 MOGSQ13724 837 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 CHRNA6Q15825 494 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 ELP2Q6IA86 826 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 XKR5Q6UX68 686 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 MARVELD2Q8N4S9 558 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 PPTC7Q8NI37 304 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 IRGQQ8WZA9 623 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 PITX2Q99697 317 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 TXN2Q99757 166 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 CCM2Q9BSQ5 444 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 SAMD10Q9BYL1 202 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 SDCBP2Q9H190 292 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 KCNMB3Q9NPA1 279 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.66□□□□□ -1.5
RFX3-204ENST00000382004 ZDHHC3Q9NYG2 299 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 EXOSC1Q9Y3B2 195 aaKnown RBP5.66□□□□□ -1.5
RFX3-204ENST00000382004 ABCA8O94911 1581 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 A6NCN8 305 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 NEMP2A6NFY4 417 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 A8MXE2 369 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 F8W036 122 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 BLOC1S1P78537 153 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 FGL1Q08830 312 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 PIGGQ5H8A4 983 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 VARS2Q5ST30 1063 aaKnown RBP5.66□□□□□ -1.5
RFX3-204ENST00000382004 RNF130Q86XS8 419 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 UBQLNLQ8IYU4 475 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 WDR20Q8TBZ3 569 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 TCTEX1D2Q8WW35 142 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 HOXB13Q92826 284 aaPredicted RBP5.66□□□□□ -1.5
RFX3-204ENST00000382004 HSH2DQ96JZ2 352 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 TFB2MQ9H5Q4 396 aaKnown RBP5.66□□□□□ -1.5
RFX3-204ENST00000382004 FZD10Q9ULW2 581 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 SMIM35A0A1B0GVV1 85 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 SPATA31C2B4DYI2 1134 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 LRCH4O75427 683 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 CELP19835 753 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 HTR7P34969 479 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 ACVR1BP36896 505 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 RAB15P59190 212 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 GHRHRQ02643 423 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 SERINC3Q13530 473 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 TRAM1L1Q8N609 369 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 PSD4Q8NDX1 1056 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 C3orf58Q8NDZ4 430 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 NLGN4YQ8NFZ3 816 aaPredicted RBP5.66□□□□□ -1.5
RFX3-204ENST00000382004 OR56A1Q8NGH5 318 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 RPLP0P6Q8NHW5 317 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 ZDHHC12Q96GR4 267 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 ZNF681Q96N22 645 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 CGREF1Q99674 301 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 C17orf62Q9BQA9 187 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 KCNH6Q9H252 994 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 MTG2Q9H4K7 406 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 LIN28AQ9H9Z2 209 aaKnown RBP5.66□□□□□ -1.5
RFX3-204ENST00000382004 C14orf119Q9NWQ9 140 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 B3GNT2Q9NY97 397 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 LSM5Q9Y4Y9 91 aaKnown RBP5.66□□□□□ -1.5
RFX3-204ENST00000382004 GLI2P10070 1586 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 SMIM28A0A1B0GU29 152 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 RBM47A0AV96 593 aaKnown RBP5.66□□□□□ -1.5
RFX3-204ENST00000382004 ITM2AO43736 263 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 MAS1P04201 325 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 TFPTP0C1Z6 253 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 AQP2P41181 271 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 UFM1P61960 85 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 KCNC4Q03721 635 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 SRYQ05066 204 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 KDELC1Q6UW63 502 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 FAM43BQ6ZT52 329 aaPredicted RBP5.66□□□□□ -1.5
RFX3-204ENST00000382004 PM20D2Q8IYS1 436 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 OR56A3Q8NH54 315 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 HAS1Q92839 578 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 PKP2Q99959 881 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 PELOQ9BRX2 385 aaKnown RBP5.66□□□□□ -1.5
RFX3-204ENST00000382004 RPS10P5Q9NQ39 176 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 SEC14L4Q9UDX3 406 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 NEXMIFQ5QGS0 1516 aa5.66□□□□□ -1.5
RFX3-204ENST00000382004 CST3P01034 146 aaPredicted RBP5.66□□□□□ -1.5
RFX3-204ENST00000382004 ERCC1P07992 297 aaPredicted RBP5.66□□□□□ -1.5
RFX3-204ENST00000382004 L1CAMP32004 1257 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms