RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 CPPED1Q9BRF8 314 aaPredicted RBP13.79□□□□□ -0.2
SYNGR1-204ENST00000381535 DUSP23Q9BVJ7 150 aa13.79□□□□□ -0.2
SYNGR1-204ENST00000381535 FAIM2Q9BWQ8 316 aa13.79□□□□□ -0.2
SYNGR1-204ENST00000381535 RAB33BQ9H082 229 aa13.79□□□□□ -0.2
SYNGR1-204ENST00000381535 GAREM1Q9H706 876 aa13.79□□□□□ -0.2
SYNGR1-204ENST00000381535 COPS7BQ9H9Q2 264 aaPredicted RBP13.79□□□□□ -0.2
SYNGR1-204ENST00000381535 FAM60AQ9NP50 221 aa13.79□□□□□ -0.2
SYNGR1-204ENST00000381535 NLGN3Q9NZ94 848 aa13.79□□□□□ -0.2
SYNGR1-204ENST00000381535 EPHA6Q9UF33 1036 aa13.79□□□□□ -0.2
SYNGR1-204ENST00000381535 FBXW2Q9UKT8 454 aa13.79□□□□□ -0.2
SYNGR1-204ENST00000381535 PADI4Q9UM07 663 aa13.79□□□□□ -0.2
SYNGR1-204ENST00000381535 SLC6A14Q9UN76 642 aa13.79□□□□□ -0.2
SYNGR1-204ENST00000381535 ERVK-11Q9UQG0 969 aa13.79□□□□□ -0.2
SYNGR1-204ENST00000381535 NEUROG3Q9Y4Z2 214 aa13.79□□□□□ -0.2
SYNGR1-204ENST00000381535 ASB4Q9Y574 426 aa13.79□□□□□ -0.2
SYNGR1-204ENST00000381535 CROCCQ5TZA2 2017 aa13.79□□□□□ -0.2
SYNGR1-204ENST00000381535 OTOGLQ3ZCN5 2332 aa13.79□□□□□ -0.2
SYNGR1-204ENST00000381535 SPTBN4Q9H254 2564 aa13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 DNAH14Q0VDD8 3507 aa13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 A0A1W2PRB8 838 aa13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 YKT6O15498 198 aa13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 ZSCAN9O15535 394 aaPredicted RBP13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 KIF1CO43896 1103 aaKnown RBP13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 ZCCHC18P0CG32 403 aa13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 MYF5P13349 255 aa13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 CERS1P27544 350 aa13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 GPR3P46089 330 aa13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 VSX2P58304 361 aaPredicted RBP13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 SUZ12Q15022 739 aaKnown RBP13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 MPEG1Q2M385 716 aa13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 MUM1Q2TAK8 710 aa13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 DGLUCYQ7Z3D6 616 aa13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 PACS2Q86VP3 889 aa13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 SPATA24Q86W54 205 aa13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 CSNK1A1LQ8N752 337 aa13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 Q8N9G6 341 aaPredicted RBP13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 OR4A15Q8NGL6 344 aa13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 OR10A6Q8NH74 314 aa13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 SAP25Q8TEE9 199 aa13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 PYDC1Q8WXC3 89 aa13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 CCDC3Q9BQI4 270 aa13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 NLNQ9BYT8 704 aa13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 MUC13Q9H3R2 512 aa13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 EPB41L1Q9H4G0 881 aa13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 IKZF5Q9H5V7 419 aa13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 CAPN10Q9HC96 672 aa13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 LYARQ9NX58 379 aaKnown RBP13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 TEX10Q9NXF1 929 aaPredicted RBP13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 STX18Q9P2W9 335 aaKnown RBP13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 EGFL7Q9UHF1 273 aa13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 VPS4AQ9UN37 437 aa13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 NUP214P35658 2090 aaPredicted RBP13.78□□□□□ -0.2
SYNGR1-204ENST00000381535 IGHV1OR21-1A0A087WYE8 117 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 A0A1W2PR48 441 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 CLIC1O00299 241 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 SRPX2O60687 465 aaPredicted RBP13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 SCELO95171 688 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 EPN2O95208 641 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 BAG2O95816 211 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 C6orf47O95873 294 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 ENGP17813 658 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 GFERP55789 205 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 OR4D2P58180 307 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 FOXK2Q01167 660 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 AMZ1Q400G9 498 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 NDUFAF5Q5TEU4 345 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 ZCCHC8Q6NZY4 707 aaKnown RBP13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 CYP2R1Q6VVX0 501 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 ABHD13Q7L211 337 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 PROSER1Q86XN7 944 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 PTRH1Q86Y79 214 aaKnown RBP13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 GOT1L1Q8NHS2 421 aaPredicted RBP13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 ZCCHC10Q8TBK6 192 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 OR5P2Q8WZ92 322 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 UCN3Q969E3 161 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 AURKBQ96GD4 344 aaPredicted RBP13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 SERINC2Q96SA4 455 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 CD180Q99467 661 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 TRIM15Q9C019 465 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 TAS2R7Q9NYW3 318 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 ACTR3BQ9P1U1 418 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 ZNF282Q9UDV7 671 aaPredicted RBP13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 USP22Q9UPT9 525 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 ATG4BQ9Y4P1 393 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 PCDHB3Q9Y5E6 796 aa13.77□□□□□ -0.21
SYNGR1-204ENST00000381535 TNRC6BQ9UPQ9 1833 aaKnown RBP13.76□□□□□ -0.21
SYNGR1-204ENST00000381535 TLCD2A6NGC4 264 aa13.76□□□□□ -0.21
SYNGR1-204ENST00000381535 PATE3B3GLJ2 98 aa13.76□□□□□ -0.21
SYNGR1-204ENST00000381535 TXNDC9O14530 226 aa13.76□□□□□ -0.21
SYNGR1-204ENST00000381535 ARHGAP33O14559 1287 aa13.76□□□□□ -0.21
SYNGR1-204ENST00000381535 GSTA4O15217 222 aa13.76□□□□□ -0.21
SYNGR1-204ENST00000381535 PROM1O43490 865 aa13.76□□□□□ -0.21
SYNGR1-204ENST00000381535 HCRTR1O43613 425 aa13.76□□□□□ -0.21
SYNGR1-204ENST00000381535 B3GALT2O43825 422 aa13.76□□□□□ -0.21
SYNGR1-204ENST00000381535 ABCB1P08183 1280 aaPredicted RBP13.76□□□□□ -0.21
SYNGR1-204ENST00000381535 ANPEPP15144 967 aa13.76□□□□□ -0.21
SYNGR1-204ENST00000381535 ALOX12P18054 663 aa13.76□□□□□ -0.21
SYNGR1-204ENST00000381535 ZNF10P21506 573 aaPredicted RBP13.76□□□□□ -0.21
SYNGR1-204ENST00000381535 TGM1P22735 817 aa13.76□□□□□ -0.21
SYNGR1-204ENST00000381535 SOX11P35716 441 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms