RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 KCNC1P48547 511 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 IRF8Q02556 426 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 SLC13A2Q13183 592 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 SERTAD2Q14140 314 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 ELAVL1Q15717 326 aaKnown RBP12.12□□□□□ -0.47
RPAIN-202ENST00000381208 C3AR1Q16581 482 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 TMEM35AQ53FP2 167 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 ABHD17CQ6PCB6 329 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 CAPN12Q6ZSI9 719 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 AMER2Q8N7J2 671 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 SNX31Q8N9S9 440 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 ANKK1Q8NFD2 765 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 UBXN10Q96LJ8 280 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 QRFPRQ96P65 431 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 KCNC2Q96PR1 638 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 TMEM79Q9BSE2 394 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 TBCDQ9BTW9 1192 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 AICDAQ9GZX7 198 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 NMRAL1Q9HBL8 299 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 LYRM4Q9HD34 91 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 TIMMDC1Q9NPL8 285 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 SMYD2Q9NRG4 433 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 PNO1Q9NRX1 252 aaKnown RBP12.12□□□□□ -0.47
RPAIN-202ENST00000381208 ADGRE2Q9UHX3 823 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 SH3BGRL2Q9UJC5 107 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 PTBP2Q9UKA9 531 aaKnown RBP12.12□□□□□ -0.47
RPAIN-202ENST00000381208 FBXW2Q9UKT8 454 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 RNF112Q9ULX5 631 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 DAPP1Q9UN19 280 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 CLCA3PQ9Y6N3 262 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 PKDREJQ9NTG1 2253 aa12.12□□□□□ -0.47
RPAIN-202ENST00000381208 CTAGE15A4D2H0 777 aa12.11□□□□□ -0.47
RPAIN-202ENST00000381208 A8MUA0 341 aa12.11□□□□□ -0.47
RPAIN-202ENST00000381208 C4orf51C9J302 202 aa12.11□□□□□ -0.47
RPAIN-202ENST00000381208 TFECO14948 347 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-202ENST00000381208 TAPBPO15533 448 aa12.11□□□□□ -0.47
RPAIN-202ENST00000381208 PHGDHO43175 533 aaKnown RBP12.11□□□□□ -0.47
RPAIN-202ENST00000381208 CTNSO60931 367 aa12.11□□□□□ -0.47
RPAIN-202ENST00000381208 TNFRSF8P28908 595 aa12.11□□□□□ -0.47
RPAIN-202ENST00000381208 HNRNPH1P31943 449 aaKnown RBP12.11□□□□□ -0.47
RPAIN-202ENST00000381208 CASP2P42575 452 aa12.11□□□□□ -0.47
RPAIN-202ENST00000381208 HSPA7P48741 367 aa12.11□□□□□ -0.47
RPAIN-202ENST00000381208 SSR4P51571 173 aa12.11□□□□□ -0.47
RPAIN-202ENST00000381208 PLA2G16P53816 162 aa12.11□□□□□ -0.47
RPAIN-202ENST00000381208 BIKQ13323 160 aa12.11□□□□□ -0.47
RPAIN-202ENST00000381208 RUNX2Q13950 521 aa12.11□□□□□ -0.47
RPAIN-202ENST00000381208 E2F2Q14209 437 aa12.11□□□□□ -0.47
RPAIN-202ENST00000381208 ZNF468Q5VIY5 522 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-202ENST00000381208 CHSY3Q70JA7 882 aa12.11□□□□□ -0.47
RPAIN-202ENST00000381208 GDF7Q7Z4P5 450 aa12.11□□□□□ -0.47
RPAIN-202ENST00000381208 TBC1D1Q86TI0 1168 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-202ENST00000381208 CTAGE6Q86UF2 777 aa12.11□□□□□ -0.47
RPAIN-202ENST00000381208 CTAGE3PQ8IX95 158 aa12.11□□□□□ -0.47
RPAIN-202ENST00000381208 CYP4Z2PQ8N1L4 340 aa12.11□□□□□ -0.47
RPAIN-202ENST00000381208 ZNF775Q96BV0 537 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-202ENST00000381208 CENPKQ9BS16 269 aa12.11□□□□□ -0.47
RPAIN-202ENST00000381208 CD244Q9BZW8 370 aa12.11□□□□□ -0.47
RPAIN-202ENST00000381208 DPH5Q9H2P9 285 aa12.11□□□□□ -0.47
RPAIN-202ENST00000381208 CAB39LQ9H9S4 337 aa12.11□□□□□ -0.47
RPAIN-202ENST00000381208 NUDT4Q9NZJ9 180 aa12.11□□□□□ -0.47
RPAIN-202ENST00000381208 TINAGQ9UJW2 476 aa12.11□□□□□ -0.47
RPAIN-202ENST00000381208 MEMO1Q9Y316 297 aa12.11□□□□□ -0.47
RPAIN-202ENST00000381208 CXorf49A8MYA2 514 aaPredicted RBP12.1□□□□□ -0.47
RPAIN-202ENST00000381208 E9PLN8 166 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 CYR61O00622 381 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 RAD51CO43502 376 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 ITGA10O75578 1167 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 CLDN14O95500 239 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 TUBB4AP04350 444 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 COX6B1P14854 86 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 GPR143P51810 404 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 LIM2P55344 173 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 PCDH1Q08174 1060 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 STX4Q12846 297 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 DOC2AQ14183 400 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 C18orf21Q32NC0 220 aaPredicted RBP12.1□□□□□ -0.47
RPAIN-202ENST00000381208 PAOXQ6QHF9 649 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 HSDL2Q6YN16 418 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 RGS9BPQ6ZS82 235 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 RAPH1Q70E73 1250 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 MCEMP1Q8IX19 187 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 CPSF7Q8N684 471 aaKnown RBP12.1□□□□□ -0.47
RPAIN-202ENST00000381208 MORN4Q8NDC4 146 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 OR5L2Q8NGL0 311 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 OR8K3Q8NH51 312 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 OR14A16Q8NHC5 309 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 C16orf52Q8NHV5 167 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 NCLNQ969V3 563 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 VKORC1Q9BQB6 163 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 PRM3Q9NNZ6 103 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 MS4A12Q9NXJ0 267 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 VTI1BQ9UEU0 232 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 ERVK-11Q9UQG0 969 aa12.1□□□□□ -0.47
RPAIN-202ENST00000381208 A0A0G2JN53 185 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 SYCE1LA8MT33 242 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 A8MVJ9 347 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 DYRK3O43781 588 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 PEX1O43933 1283 aa12.09□□□□□ -0.47
RPAIN-202ENST00000381208 CCNT2O60583 730 aaKnown RBP12.09□□□□□ -0.47
RPAIN-202ENST00000381208 SCELO95171 688 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms