RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 INPP5KQ9BT40 448 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 PLAC1Q9HBJ0 212 aa13.59□□□□□ -0.23
SHROOM1-203ENST00000378679 FAM86C2PA6NEL3 165 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 SDC3O75056 442 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 ZNF217O75362 1048 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 ETFAP13804 333 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 ARSFP54793 590 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 MRPS21P82921 87 aaKnown RBP13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 CTBSQ01459 385 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 DOK4Q8TEW6 326 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 C12orf43Q96C57 262 aaKnown RBP13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 FBXL20Q96IG2 436 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 NDC1Q9BTX1 674 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 SLC6A17Q9H1V8 727 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 PNO1Q9NRX1 252 aaKnown RBP13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 N6AMT1Q9Y5N5 214 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 ATG2BQ96BY7 2078 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 SCAMP2O15127 329 aaKnown RBP13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 FZD6O60353 706 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 CDC123O75794 336 aaPredicted RBP13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 H1F0P07305 194 aaKnown RBP13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 PRG2P13727 222 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 IL1RNP18510 177 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 UQCRC2P22695 453 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 LRP8Q14114 963 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 CTC1Q2NKJ3 1217 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 FIGLAQ6QHK4 219 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 CCDC80Q76M96 950 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 METTL27Q8N6F8 245 aaPredicted RBP13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 AMER2Q8N7J2 671 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 WDR36Q8NI36 951 aaKnown RBP13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 LYSMD1Q96S90 227 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 TVP23BQ9NYZ1 205 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 ST14Q9Y5Y6 855 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 EFCAB10A6NFE3 127 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 GNB5O14775 395 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 ARHGEF15O94989 841 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 FUT4P22083 530 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 IMPA1P29218 277 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 ZXDBP98169 803 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 TMEM35AQ53FP2 167 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 CRB2Q5IJ48 1285 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 C6orf120Q7Z4R8 191 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 DGAT2Q96PD7 388 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 MACROD1Q9BQ69 325 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 TMEM184CQ9NVA4 438 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 COPS7AQ9UBW8 275 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 WDR45Q9Y484 360 aa13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 DNMT3AQ9Y6K1 912 aaPredicted RBP13.58□□□□□ -0.24
SHROOM1-203ENST00000378679 C17orf113A0A1B0GUU1 675 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 OR7A17O14581 309 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 UBXN7O94888 489 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 OLFM2O95897 454 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 TACR1P25103 407 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 ALDH3A2P51648 485 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 ARMC4Q5T2S8 1044 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 OR4N5Q8IXE1 308 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 HCAR2Q8TDS4 363 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 PMEPA1Q969W9 287 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 RELTQ969Z4 430 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 MMABQ96EY8 250 aaPredicted RBP13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 RPF2Q9H7B2 306 aaKnown RBP13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 MS4A12Q9NXJ0 267 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 MARK1Q9P0L2 795 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 RHCGQ9UBD6 479 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 GSTK1Q9Y2Q3 226 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 PRAMEF26H0Y7S4 382 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 H3BNX3 289 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 K7ESM1 405 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 MED26O95402 600 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 OR12D1P0DN82 309 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 PSMB5P28074 263 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 SRP54P61011 504 aaKnown RBP13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 TAP2Q03519 686 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 ZNF33BQ06732 778 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 FADDQ13158 208 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 SPANXN2Q5MJ10 180 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 RETREG3Q86VR2 466 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 IQCHQ86VS3 1027 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 NRROSQ86YC3 692 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 OR52E1Q8NGJ3 308 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 PIGKQ92643 395 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 TGM7Q96PF1 710 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 SPATA6Q9NWH7 488 aaPredicted RBP13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 SLAMF8Q9P0V8 285 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 TNFRSF4P43489 277 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 HNRNPKP61978 463 aaKnown RBP eCLIP13.57□□□□□ -0.242e-6■■■■□ 21.1
SHROOM1-203ENST00000378679 SIM1P81133 766 aaPredicted RBP13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 MC1RQ01726 317 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 DNASE1L3Q13609 305 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 GPNMBQ14956 572 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 HENMT1Q5T8I9 393 aaKnown RBP13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 MLIPQ5VWP3 458 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 ZNF544Q6NX49 715 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 TMEM150AQ86TG1 271 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 DTWD1Q8N5C7 304 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 CSNK1A1LQ8N752 337 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 ZNF248Q8NDW4 579 aa13.57□□□□□ -0.24
SHROOM1-203ENST00000378679 TMEM125Q96AQ2 219 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms