RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 SEC14L2O76054 403 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 IFNA14P01570 189 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 TUBA3CQ13748 450 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 ELOAQ14241 798 aaKnown RBP19.27■□□□□ 0.68
VSX1-202ENST00000376709 KIAA1614Q5VZ46 1190 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 SDE2Q6IQ49 451 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 FAHD1Q6P587 224 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 FBLIM1Q8WUP2 373 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 ZNF347Q96SE7 839 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 FZD3Q9NPG1 666 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 CLDND1Q9NY35 253 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 PLEKHM1Q9Y4G2 1056 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 HSPE1-MOB4S4R3N1 261 aa19.27■□□□□ 0.68
VSX1-202ENST00000376709 TBC1D3DA0A087WVF3 549 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 TBC1D3IA0A087WXS9 549 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 TBC1D3EA0A087X179 549 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 TBC1D3KA0A087X1G2 549 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 TBC1D3FA6NER0 549 aaPredicted RBP19.26■□□□□ 0.67
VSX1-202ENST00000376709 OR52A4PA6NMU1 304 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 TBC1D3LB9A6J9 549 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 TNFRSF11BO00300 401 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 TBC1D3HP0C7X1 549 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 DDX5P17844 614 aaKnown RBP19.26■□□□□ 0.67
VSX1-202ENST00000376709 MATN1P21941 496 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 NTSR1P30989 418 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 MAPK10P53779 464 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 DSTNP60981 165 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 CSNK1G2P78368 415 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 PRDX1Q06830 199 aaKnown RBP19.26■□□□□ 0.67
VSX1-202ENST00000376709 CLCA4Q14CN2 919 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 TBC1D3GQ6DHY5 549 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 TBC1D3CQ6IPX1 549 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 CCDC80Q76M96 950 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 TBC1D3Q8IZP1 549 aaPredicted RBP19.26■□□□□ 0.67
VSX1-202ENST00000376709 ZNF566Q969W8 418 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 DTNBP1Q96EV8 351 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 BTBD1Q9H0C5 482 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 RMI1Q9H9A7 625 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 TMEM9Q9P0T7 183 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 C5AR2Q9P296 337 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 SLC17A4Q9Y2C5 497 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 LCMT2O60294 686 aaKnown RBP19.26■□□□□ 0.67
VSX1-202ENST00000376709 ARAFP10398 606 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 EPHA2P29317 976 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 FMO3P31513 532 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 IGFALSP35858 605 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 HPCAP84074 193 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 EEF1A2Q05639 463 aaKnown RBP19.26■□□□□ 0.67
VSX1-202ENST00000376709 CEACAM20Q6UY09 585 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 NATD1Q8N6N6 113 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 RAB11FIP5Q9BXF6 653 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 SLAMF7Q9NQ25 335 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 LHX9Q9NQ69 397 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 PAK1IP1Q9NWT1 392 aaPredicted RBP19.26■□□□□ 0.67
VSX1-202ENST00000376709 NDRG4Q9ULP0 352 aaKnown RBP19.26■□□□□ 0.67
VSX1-202ENST00000376709 LYVE1Q9Y5Y7 322 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 MYO10Q9HD67 2058 aa19.26■□□□□ 0.67
VSX1-202ENST00000376709 SCAMP1O15126 338 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 SH3BP5O60239 455 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 ITGA2P17301 1181 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 PLA2G16P53816 162 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 ADPRHP54922 357 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 SPIBQ01892 262 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 GRSF1Q12849 480 aaKnown RBP eCLIP19.25■□□□□ 0.67
VSX1-202ENST00000376709 NPRL3Q12980 569 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 HSPB3Q12988 150 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 TMEM196Q5HYL7 178 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 CRB2Q5IJ48 1285 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 TSEN54Q7Z6J9 526 aaKnown RBP19.25■□□□□ 0.67
VSX1-202ENST00000376709 SMYD1Q8NB12 490 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 OR2A1Q8NGT9 310 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 OR5P2Q8WZ92 322 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 EXOSC8Q96B26 276 aaKnown RBP19.25■□□□□ 0.67
VSX1-202ENST00000376709 DGCR6LQ9BY27 220 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 NEUROD4Q9HD90 331 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 RAB23Q9ULC3 237 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 IGKV1-8A0A0C4DH67 115 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 A0A0G2JN53 185 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 A0A1W2PPW3 197 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 CACNB4O00305 520 aaPredicted RBP19.25■□□□□ 0.67
VSX1-202ENST00000376709 SLC31A1O15431 190 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 TMPRSS11DO60235 418 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 STT3AP46977 705 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 TMBIM6P55061 237 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 RPS26P62854 115 aaKnown RBP19.25■□□□□ 0.67
VSX1-202ENST00000376709 CYP27C1Q4G0S4 372 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 B3GNT8Q7Z7M8 397 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 FAM124AQ86V42 546 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 TSPYL5Q86VY4 417 aaPredicted RBP19.25■□□□□ 0.67
VSX1-202ENST00000376709 OR52J3Q8NH60 311 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 GIPC3Q8TF64 312 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 ZNF300Q96RE9 604 aaPredicted RBP19.25■□□□□ 0.67
VSX1-202ENST00000376709 APOOQ9BUR5 198 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 AASSQ9UDR5 926 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 WARS2Q9UGM6 360 aaKnown RBP19.25■□□□□ 0.67
VSX1-202ENST00000376709 SH3GLB1Q9Y371 365 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 ZNF451Q9Y4E5 1061 aa19.25■□□□□ 0.67
VSX1-202ENST00000376709 GOLGA4Q13439 2230 aaKnown RBP19.24■□□□□ 0.67
VSX1-202ENST00000376709 PKLRP30613 574 aa19.24■□□□□ 0.67
VSX1-202ENST00000376709 GRK3P35626 688 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms