RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 ST13P5Q8NFI4 369 aaPredicted RBP13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 VOPP1Q96AW1 172 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 DEPDC7Q96QD5 511 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 VPS35Q96QK1 796 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 OR4K3Q96R72 315 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 SNX18Q96RF0 628 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 PHOX2BQ99453 314 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 TMEM246Q9BRR3 403 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 SLC35A5Q9BS91 424 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 C2orf49Q9BVC5 232 aaPredicted RBP13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 SPATA9Q9BWV2 254 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 BEX2Q9BXY8 128 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 ZBP1Q9H171 429 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 DYRK4Q9NR20 520 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 NPAP1Q9NZP6 1156 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 HCN4Q9Y3Q4 1203 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 YIPF1Q9Y548 306 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 SAP18O00422 153 aaKnown RBP13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 GADD45GO95257 159 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 TIMM50Q3ZCQ8 353 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 IER5LQ5T953 404 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 FAM180BQ6P0A1 224 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 TPRG1Q6ZUI0 275 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 RAB43Q86YS6 212 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 UBE2J2Q8N2K1 259 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 LMNTD1Q8N9Z9 388 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 FLCNQ8NFG4 579 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 HUS1BQ8NHY5 278 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 C9orf43Q8TAL5 461 aaPredicted RBP13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 ADAMTS19Q8TE59 1207 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 C2orf15Q8WU43 125 aaKnown RBP13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 COQ8BQ96D53 544 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 TMCO6Q96DC7 493 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 RERGLQ9H628 205 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 ABCB8Q9NUT2 735 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 CLN6Q9NWW5 311 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 PAQR5Q9NXK6 330 aaPredicted RBP13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 RAB23Q9ULC3 237 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 TRAPPC4Q9Y296 219 aa13.5□□□□□ -0.25
CLCNKA-202ENST00000375692 CCDC88CQ9P219 2028 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 A0A075B6Q4 140 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 A0A1W2PQ09 198 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 MEIOCA2RUB1 952 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 OR2AG2A6NM03 316 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 TGM5O43548 720 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 FHP07954 510 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 CHRM5P08912 532 aaPredicted RBP13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 ATP1B2P14415 290 aaPredicted RBP13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 PPIBP23284 216 aaKnown RBP13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 SERPINA4P29622 427 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 CTNNB1P35222 781 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 PPM1AP35813 382 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 XCR1P46094 333 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 RPS13P62277 151 aaKnown RBP13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 GCNT6Q5T4J0 391 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 ANXA8L1Q5VT79 327 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 FRMPD2BQ6IN97 320 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 TMPRSS11AQ6ZMR5 421 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 RNF130Q86XS8 419 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 HOMEZQ8IX15 550 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 SLC34A3Q8N130 599 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 LILRA3Q8N6C8 439 aaPredicted RBP13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 ARL14EPQ8N8R7 260 aaPredicted RBP13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 SCAMP4Q969E2 229 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 SCRN2Q96FV2 425 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 PIP5K1AQ99755 562 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 DNAJC27Q9NZQ0 273 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 KLHL42Q9P2K6 505 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 FTSJ1Q9UET6 329 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 CORO2BQ9UQ03 480 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 EYSQ5T1H1 3165 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 PLXNB3Q9ULL4 1909 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 LINC01553A4QN01 128 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 ZAR1LA6NP61 321 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 ARHGEF33A8MVX0 844 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 NRG2O14511 850 aaPredicted RBP13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 SOCS5O75159 536 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 SOX14O95416 240 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 CTSAP10619 480 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 IL7P13232 177 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 CBLP22681 906 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 CD70P32970 193 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 HNF4AP41235 474 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 CRISP1P54107 249 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 C21orf58P58505 322 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 CDK10Q15131 360 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 PAQR6Q6TCH4 344 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 OR7G3Q8NG95 312 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 FYTTD1Q96QD9 318 aaKnown RBP13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 PKP4Q99569 1192 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 BRD9Q9H8M2 597 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 CERS4Q9HA82 394 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 NMNAT1Q9HAN9 279 aaPredicted RBP13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 ZNF282Q9UDV7 671 aaPredicted RBP13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 PCDHGB2Q9Y5G2 931 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 MYO9BQ13459 2157 aa13.49□□□□□ -0.25
CLCNKA-202ENST00000375692 KIAA1671Q9BY89 1806 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 DOCK6Q96HP0 2047 aa13.48□□□□□ -0.25
CLCNKA-202ENST00000375692 IGLV3-16A0A075B6K0 115 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms