RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 ITPAQ9BY32 194 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 TCHHQ07283 1943 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 DFNA5O60443 496 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 HTR1AP08908 422 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 CST6Q15828 149 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 OR51A7Q8NH64 312 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 ZDHHC1Q8WTX9 485 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 STRADBQ9C0K7 418 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 MRM3Q9HC36 420 aaKnown RBP16.49■□□□□ 0.23
MCF2L-203ENST00000375604 POLE4Q9NR33 117 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 POLE3Q9NRF9 147 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 TAS2R9Q9NYW1 312 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 MYEF2Q9P2K5 600 aaKnown RBP16.49■□□□□ 0.23
MCF2L-203ENST00000375604 FETUBQ9UGM5 382 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 NPIPA2E9PIF3 369 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 NPIPA3F8WFD2 350 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 HOXA11P31270 313 aaPredicted RBP16.49■□□□□ 0.23
MCF2L-203ENST00000375604 SHMT2P34897 504 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 CLDN2P57739 230 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 GALK2Q01415 458 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 NIPAL4Q0D2K0 466 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 TRAM1L1Q8N609 369 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 ZNF283Q8N7M2 679 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 TMED5Q9Y3A6 229 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 L7N2F9 121 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 RCBTB2O95199 551 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 AGR2O95994 175 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 UQCRC1P31930 480 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 ARSDP51689 593 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 VAMP2P63027 116 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 RUNX3Q13761 415 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 DEFB133Q30KQ1 61 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 RPS26P11Q5JNZ5 115 aaPredicted RBP16.49■□□□□ 0.23
MCF2L-203ENST00000375604 LRRTM3Q86VH5 581 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 SMARCD2Q92925 531 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 KCMF1Q9P0J7 381 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 CXXC1Q9P0U4 656 aaPredicted RBP16.49■□□□□ 0.23
MCF2L-203ENST00000375604 C19orf25Q9UFG5 118 aaPredicted RBP16.49■□□□□ 0.23
MCF2L-203ENST00000375604 PLOD2O00469 737 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 FOSL2P15408 326 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 HOXB6P17509 224 aaKnown RBP16.49■□□□□ 0.23
MCF2L-203ENST00000375604 CEBPBP17676 345 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 GRK5P34947 590 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 PLEKHS1Q5SXH7 462 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 GTF2IRD2BQ6EKJ0 949 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 GTF2IRD2Q86UP8 949 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 IMP4Q96G21 291 aaKnown RBP16.49■□□□□ 0.23
MCF2L-203ENST00000375604 TSGA13Q96PP4 275 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 SLC2A13Q96QE2 648 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 SRA1Q9HD15 236 aaKnown RBP16.49■□□□□ 0.23
MCF2L-203ENST00000375604 TMEM59LQ9UK28 342 aa16.49■□□□□ 0.23
MCF2L-203ENST00000375604 MAOBP27338 520 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 DEFB103AP81534 67 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 EXOC3L2Q2M3D2 409 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 WSCD2Q2TBF2 565 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 CARM1Q86X55 608 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 SLC7A6OSQ96CW6 309 aaPredicted RBP16.48■□□□□ 0.23
MCF2L-203ENST00000375604 GSKIPQ9P0R6 139 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 OR2AT4A6NND4 320 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 AHSA1O95433 338 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 OR4D2P58180 307 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 PON3Q15166 354 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 GNPDA2Q8TDQ7 276 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 ACTL8Q9H568 366 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 A0A1W2PP18 115 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 UQCRC2P22695 453 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 MEX3DQ86XN8 651 aaKnown RBP16.48■□□□□ 0.23
MCF2L-203ENST00000375604 NXPE2Q96DL1 559 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 C14orf105Q9NVL8 296 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 VNN2O95498 520 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 BMP1P13497 986 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 EMX2Q04743 252 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 PLCXD2Q0VAA5 305 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 IRF5Q13568 498 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 PRR22Q8IZ63 422 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.48■□□□□ 0.23
MCF2L-203ENST00000375604 GATAD2BQ8WXI9 593 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 ERMAPQ96PL5 475 aaPredicted RBP16.48■□□□□ 0.23
MCF2L-203ENST00000375604 ZFR2Q9UPR6 939 aaKnown RBP16.48■□□□□ 0.23
MCF2L-203ENST00000375604 OR2B3O76000 313 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 KDM4BO94953 1096 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 HMGN1P05114 100 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 S100A9P06702 114 aaKnown RBP16.48■□□□□ 0.23
MCF2L-203ENST00000375604 OCLNQ16625 522 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 TOMM5Q8N4H5 51 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 LMO3Q8TAP4 145 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 TMEM80Q96HE8 168 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 GMLQ99445 158 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 MGAT4AQ9UM21 535 aa16.48■□□□□ 0.23
MCF2L-203ENST00000375604 IL1RNP18510 177 aa16.47■□□□□ 0.23
MCF2L-203ENST00000375604 VAMP1P23763 118 aa16.47■□□□□ 0.23
MCF2L-203ENST00000375604 GPR4P46093 362 aa16.47■□□□□ 0.23
MCF2L-203ENST00000375604 BLMHQ13867 455 aa16.47■□□□□ 0.23
MCF2L-203ENST00000375604 IGFN1Q86VF2 1251 aa16.47■□□□□ 0.23
MCF2L-203ENST00000375604 CSNK1A1LQ8N752 337 aa16.47■□□□□ 0.23
MCF2L-203ENST00000375604 MAL2Q969L2 176 aa16.47■□□□□ 0.23
MCF2L-203ENST00000375604 CIDECQ96AQ7 238 aaPredicted RBP16.47■□□□□ 0.23
MCF2L-203ENST00000375604 CCDC59Q9P031 241 aaKnown RBP16.47■□□□□ 0.23
MCF2L-203ENST00000375604 CFL2Q9Y281 166 aa16.47■□□□□ 0.23
MCF2L-203ENST00000375604 CBFA2T3O75081 653 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms