RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 JPH3Q8WXH2 748 aaPredicted RBP20.22■□□□□ 0.83
UPF3A-202ENST00000375299 CXorf40BQ96DE9 158 aa20.22■□□□□ 0.83
UPF3A-202ENST00000375299 MND1Q9BWT6 205 aa20.22■□□□□ 0.83
UPF3A-202ENST00000375299 C1GALT1Q9NS00 363 aa20.22■□□□□ 0.83
UPF3A-202ENST00000375299 ATP6V1HQ9UI12 483 aa20.22■□□□□ 0.83
UPF3A-202ENST00000375299 C6orf47O95873 294 aa20.22■□□□□ 0.83
UPF3A-202ENST00000375299 IGSF6O95976 241 aa20.22■□□□□ 0.83
UPF3A-202ENST00000375299 ALPPP05187 535 aa20.22■□□□□ 0.83
UPF3A-202ENST00000375299 RHCEP18577 417 aa20.22■□□□□ 0.83
UPF3A-202ENST00000375299 DGKEP52429 567 aa20.22■□□□□ 0.83
UPF3A-202ENST00000375299 SNRPGP62308 76 aaKnown RBP20.22■□□□□ 0.83
UPF3A-202ENST00000375299 FAM209AQ5JX71 171 aa20.22■□□□□ 0.83
UPF3A-202ENST00000375299 SERPINA13PQ6UXR4 307 aa20.22■□□□□ 0.83
UPF3A-202ENST00000375299 TAS1R1Q7RTX1 841 aa20.22■□□□□ 0.83
UPF3A-202ENST00000375299 FAM217AQ8IXS0 508 aa20.22■□□□□ 0.83
UPF3A-202ENST00000375299 TAGAPQ8N103 731 aa20.22■□□□□ 0.83
UPF3A-202ENST00000375299 CLP1Q92989 425 aaKnown RBP20.22■□□□□ 0.83
UPF3A-202ENST00000375299 BHMTQ93088 406 aa20.22■□□□□ 0.83
UPF3A-202ENST00000375299 C11orf54Q9H0W9 315 aaPredicted RBP20.22■□□□□ 0.83
UPF3A-202ENST00000375299 TMEM245Q9H330 911 aa20.22■□□□□ 0.83
UPF3A-202ENST00000375299 RHCGQ9UBD6 479 aa20.22■□□□□ 0.83
UPF3A-202ENST00000375299 ACSL6Q9UKU0 697 aa20.22■□□□□ 0.83
UPF3A-202ENST00000375299 SSR3Q9UNL2 185 aa20.22■□□□□ 0.83
UPF3A-202ENST00000375299 TMEM88BA6NKF7 163 aa20.21■□□□□ 0.83
UPF3A-202ENST00000375299 B4DXG7 233 aa20.21■□□□□ 0.83
UPF3A-202ENST00000375299 MYL9P24844 172 aa20.21■□□□□ 0.83
UPF3A-202ENST00000375299 MLLT3P42568 568 aaPredicted RBP20.21■□□□□ 0.83
UPF3A-202ENST00000375299 ZNF770Q6IQ21 691 aaPredicted RBP20.21■□□□□ 0.83
UPF3A-202ENST00000375299 XKRXQ6PP77 449 aa20.21■□□□□ 0.83
UPF3A-202ENST00000375299 BTN2A2Q8WVV5 523 aa20.21■□□□□ 0.83
UPF3A-202ENST00000375299 ABCB9Q9NP78 766 aa20.21■□□□□ 0.83
UPF3A-202ENST00000375299 RPRD1BQ9NQG5 326 aaKnown RBP20.21■□□□□ 0.83
UPF3A-202ENST00000375299 TRBC2A0A5B9 178 aa20.21■□□□□ 0.83
UPF3A-202ENST00000375299 WWP2O00308 870 aa20.21■□□□□ 0.83
UPF3A-202ENST00000375299 TPST2O60704 377 aa20.21■□□□□ 0.83
UPF3A-202ENST00000375299 CSF3P09919 207 aa20.21■□□□□ 0.83
UPF3A-202ENST00000375299 ATP1B2P14415 290 aaPredicted RBP20.21■□□□□ 0.83
UPF3A-202ENST00000375299 TUFMP49411 452 aaKnown RBP20.21■□□□□ 0.83
UPF3A-202ENST00000375299 PTSQ03393 145 aa20.21■□□□□ 0.83
UPF3A-202ENST00000375299 NCF4Q15080 339 aa20.21■□□□□ 0.83
UPF3A-202ENST00000375299 ZNF630Q2M218 657 aaPredicted RBP20.21■□□□□ 0.83
UPF3A-202ENST00000375299 TMEM201Q5SNT2 666 aa20.21■□□□□ 0.83
UPF3A-202ENST00000375299 TRIM40Q6P9F5 258 aa20.21■□□□□ 0.83
UPF3A-202ENST00000375299 CCDC149Q6ZUS6 474 aa20.21■□□□□ 0.83
UPF3A-202ENST00000375299 CASD1Q96PB1 797 aa20.21■□□□□ 0.83
UPF3A-202ENST00000375299 POLR2J2Q9GZM3 115 aaKnown RBP20.21■□□□□ 0.83
UPF3A-202ENST00000375299 MIXL1Q9H2W2 232 aa20.21■□□□□ 0.83
UPF3A-202ENST00000375299 REEP4Q9H6H4 257 aa20.21■□□□□ 0.83
UPF3A-202ENST00000375299 ACOXLQ9NUZ1 547 aa20.21■□□□□ 0.83
UPF3A-202ENST00000375299 DNAJC27Q9NZQ0 273 aa20.21■□□□□ 0.83
UPF3A-202ENST00000375299 TMPRSS11EQ9UL52 423 aa20.21■□□□□ 0.83
UPF3A-202ENST00000375299 TMA7Q9Y2S6 64 aaKnown RBP20.21■□□□□ 0.83
UPF3A-202ENST00000375299 FAM227AF5H4B4 570 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 CDRT1O95170 752 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 HBQ1P09105 142 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 CAP1Q01518 475 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 SLC35F1Q5T1Q4 408 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 RNF180Q86T96 592 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 NANOGP1Q8N7R0 232 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 OR9Q1Q8NGQ5 310 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 SLC25A46Q96AG3 418 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 FRMD6Q96NE9 622 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 BRD9Q9H8M2 597 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 RNF121Q9H920 327 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 DKK3Q9UBP4 350 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 HELZP42694 1942 aaKnown RBP20.2■□□□□ 0.82
UPF3A-202ENST00000375299 ANAPC1Q9H1A4 1944 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 A0A0B4J293 547 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 SEC14L5O43304 696 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 ZNF8P17098 575 aaPredicted RBP20.2■□□□□ 0.82
UPF3A-202ENST00000375299 LHCGRP22888 699 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 PCBP3P57721 371 aaKnown RBP20.2■□□□□ 0.82
UPF3A-202ENST00000375299 MXD1Q05195 221 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 SREBF2Q12772 1141 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 MLLT11Q13015 90 aaPredicted RBP20.2■□□□□ 0.82
UPF3A-202ENST00000375299 RASGRP3Q8IV61 690 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 HUS1BQ8NHY5 278 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 RNF31Q96EP0 1072 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 SCRN2Q96FV2 425 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 MSLNLQ96KJ4 702 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 BEX2Q9BXY8 128 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 ANGPT4Q9Y264 503 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 MAP4K5Q9Y4K4 846 aa20.2■□□□□ 0.82
UPF3A-202ENST00000375299 THSD7BQ9C0I4 1608 aa20.19■□□□□ 0.82
UPF3A-202ENST00000375299 ZNF821O75541 412 aaPredicted RBP20.19■□□□□ 0.82
UPF3A-202ENST00000375299 RECKO95980 971 aa20.19■□□□□ 0.82
UPF3A-202ENST00000375299 IFNW1P05000 195 aa20.19■□□□□ 0.82
UPF3A-202ENST00000375299 OSMP13725 252 aa20.19■□□□□ 0.82
UPF3A-202ENST00000375299 SMAD3P84022 425 aaKnown RBP20.19■□□□□ 0.82
UPF3A-202ENST00000375299 CD83Q01151 205 aa20.19■□□□□ 0.82
UPF3A-202ENST00000375299 ELAVL2Q12926 359 aaKnown RBP20.19■□□□□ 0.82
UPF3A-202ENST00000375299 LEXMQ3ZCV2 418 aa20.19■□□□□ 0.82
UPF3A-202ENST00000375299 PDZK1Q5T2W1 519 aa20.19■□□□□ 0.82
UPF3A-202ENST00000375299 GDPD1Q8N9F7 314 aa20.19■□□□□ 0.82
UPF3A-202ENST00000375299 OR7G3Q8NG95 312 aa20.19■□□□□ 0.82
UPF3A-202ENST00000375299 MED8Q96G25 268 aa20.19■□□□□ 0.82
UPF3A-202ENST00000375299 ZIC5Q96T25 663 aa20.19■□□□□ 0.82
UPF3A-202ENST00000375299 TRIM39Q9HCM9 518 aa20.19■□□□□ 0.82
UPF3A-202ENST00000375299 NDOR1Q9UHB4 597 aa20.19■□□□□ 0.82
UPF3A-202ENST00000375299 KCND3Q9UK17 655 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms