RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 PHF10Q8WUB8 498 aaKnown RBP10.33□□□□□ -0.76
CXCL12-203ENST00000374429 RPL3LQ92901 407 aaKnown RBP10.33□□□□□ -0.76
CXCL12-203ENST00000374429 ISOC1Q96CN7 298 aa10.33□□□□□ -0.76
CXCL12-203ENST00000374429 LMLNQ96KR4 655 aa10.33□□□□□ -0.76
CXCL12-203ENST00000374429 DPH7Q9BTV6 452 aa10.33□□□□□ -0.76
CXCL12-203ENST00000374429 NLNQ9BYT8 704 aa10.33□□□□□ -0.76
CXCL12-203ENST00000374429 ZCCHC3Q9NUD5 404 aaKnown RBP10.33□□□□□ -0.76
CXCL12-203ENST00000374429 CNOT1A5YKK6 2376 aaKnown RBP10.33□□□□□ -0.76
CXCL12-203ENST00000374429 MTRF1O75570 445 aaKnown RBP10.33□□□□□ -0.76
CXCL12-203ENST00000374429 EFEMP2O95967 443 aa10.33□□□□□ -0.76
CXCL12-203ENST00000374429 CISD3P0C7P0 127 aa10.33□□□□□ -0.76
CXCL12-203ENST00000374429 OR12D1P0DN82 309 aa10.33□□□□□ -0.76
CXCL12-203ENST00000374429 TIA1P31483 386 aaKnown RBP eCLIP10.33□□□□□ -0.76
CXCL12-203ENST00000374429 ACSL1P33121 698 aa10.33□□□□□ -0.76
CXCL12-203ENST00000374429 PRLHRP49683 370 aa10.33□□□□□ -0.76
CXCL12-203ENST00000374429 CLK1P49759 484 aaKnown RBP10.33□□□□□ -0.76
CXCL12-203ENST00000374429 SLC16A1P53985 500 aa10.33□□□□□ -0.76
CXCL12-203ENST00000374429 LSM11P83369 360 aaKnown RBP eCLIP10.33□□□□□ -0.76
CXCL12-203ENST00000374429 IRF4Q15306 451 aa10.33□□□□□ -0.76
CXCL12-203ENST00000374429 BCL2A1Q16548 175 aa10.33□□□□□ -0.76
CXCL12-203ENST00000374429 SLC36A3Q495N2 470 aa10.33□□□□□ -0.76
CXCL12-203ENST00000374429 GALNT13Q8IUC8 556 aa10.33□□□□□ -0.76
CXCL12-203ENST00000374429 CAPSLQ8WWF8 208 aa10.33□□□□□ -0.76
CXCL12-203ENST00000374429 SIPA1Q96FS4 1042 aa10.33□□□□□ -0.76
CXCL12-203ENST00000374429 MCOLN1Q9GZU1 580 aa10.33□□□□□ -0.76
CXCL12-203ENST00000374429 LHPPQ9H008 270 aa10.33□□□□□ -0.76
CXCL12-203ENST00000374429 DCAF13Q9NV06 445 aaKnown RBP10.33□□□□□ -0.76
CXCL12-203ENST00000374429 TMEM184CQ9NVA4 438 aa10.33□□□□□ -0.76
CXCL12-203ENST00000374429 SPHK1Q9NYA1 384 aa10.33□□□□□ -0.76
CXCL12-203ENST00000374429 SLC6A14Q9UN76 642 aa10.33□□□□□ -0.76
CXCL12-203ENST00000374429 DMDP11532 3685 aa10.33□□□□□ -0.76
CXCL12-203ENST00000374429 M0R3G1 203 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 BTN3A3O00478 584 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 SLCO2B1O94956 709 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 ALPLP05186 524 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 LINC00271P0C7V0 271 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 DBTP11182 482 aaKnown RBP10.32□□□□□ -0.76
CXCL12-203ENST00000374429 SLC6A12P48065 614 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 HTRA4P83105 476 aaPredicted RBP10.32□□□□□ -0.76
CXCL12-203ENST00000374429 DAB2P98082 770 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 ZNF763Q0D2J5 394 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 RFPL4BQ6ZWI9 263 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 C11orf65Q8NCR3 313 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 TNIP2Q8NFZ5 429 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 C16orf78Q8WTQ4 265 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 LCN9Q8WX39 176 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 HERVK_113Q902F9 699 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 INSM2Q96T92 566 aaPredicted RBP10.32□□□□□ -0.76
CXCL12-203ENST00000374429 ANKRD60Q9BZ19 345 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 DMTF1Q9Y222 760 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 CEPT1Q9Y6K0 416 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 ANKRD34BA5PLL1 514 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 KPNA4O00629 521 aaPredicted RBP10.32□□□□□ -0.76
CXCL12-203ENST00000374429 SCAMP2O15127 329 aaKnown RBP10.32□□□□□ -0.76
CXCL12-203ENST00000374429 SCELO95171 688 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 LCKP06239 509 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 DUSP7Q16829 419 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 DEFB134Q4QY38 66 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 PNCKQ6P2M8 343 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 GALNT18Q6P9A2 607 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 NXPE4Q6UWF7 544 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 SPERTQ8NA61 448 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 ART5Q96L15 291 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 CPPED1Q9BRF8 314 aaPredicted RBP10.32□□□□□ -0.76
CXCL12-203ENST00000374429 SLC29A3Q9BZD2 475 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 ZNF556Q9HAH1 456 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 SLC5A10A0PJK1 596 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 ZSCAN5BA6NJL1 495 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 M0R3H8 397 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 PCDH17O14917 1159 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 RYKP34925 604 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 CTSKP43235 329 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 NCBP2P52298 156 aaKnown RBP eCLIP10.32□□□□□ -0.76
CXCL12-203ENST00000374429 PPP2CBP62714 309 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 PPP2CAP67775 309 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 BTN3A2P78410 334 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 CDK6Q00534 326 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 SRSF11Q05519 484 aaKnown RBP10.32□□□□□ -0.76
CXCL12-203ENST00000374429 CSTF3Q12996 717 aaKnown RBP10.32□□□□□ -0.76
CXCL12-203ENST00000374429 EIF2B5Q13144 721 aaKnown RBP10.32□□□□□ -0.76
CXCL12-203ENST00000374429 PIN1Q13526 163 aaPredicted RBP10.32□□□□□ -0.76
CXCL12-203ENST00000374429 RGNQ15493 299 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 MED22Q15528 200 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 NPTX1Q15818 432 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 B3GLCTQ6Y288 498 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 TCAIMQ8N3R3 496 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 SLC5A8Q8N695 610 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 IQCF1Q8N6M8 205 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 OR8J3Q8NGG0 315 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 NRBF2Q96F24 287 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 PDXPQ96GD0 296 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 VPS35Q96QK1 796 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 NODALQ96S42 347 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 LYSMD1Q96S90 227 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 C1QTNF3Q9BXJ4 246 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 ZDHHC5Q9C0B5 715 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 C6orf62Q9GZU0 229 aaPredicted RBP10.32□□□□□ -0.76
CXCL12-203ENST00000374429 SYNDIG1Q9H7V2 258 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 POLE4Q9NR33 117 aa10.32□□□□□ -0.76
CXCL12-203ENST00000374429 SIRT5Q9NXA8 310 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms