RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 DOT1LQ8TEK3 1739 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 CHRM1P11229 460 aaPredicted RBP13.8□□□□□ -0.2
TRAF1-201ENST00000373887 BMPR1AP36894 532 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 MAGEA3P43357 314 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 MEP1AQ16819 746 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 ERI1Q8IV48 349 aaKnown RBP13.8□□□□□ -0.2
TRAF1-201ENST00000373887 CAMKVQ8NCB2 501 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 SSX3Q99909 188 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 TMEM248Q9NWD8 314 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 HRASLS2Q9NWW9 162 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 RCBTB2O95199 551 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 GGT5P36269 586 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 SOX2P48431 317 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 CDH11P55287 796 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 VSX2P58304 361 aaPredicted RBP13.8□□□□□ -0.2
TRAF1-201ENST00000373887 GPRC6AQ5T6X5 926 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 CEACAM20Q6UY09 585 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 ERN2Q76MJ5 926 aaKnown RBP13.8□□□□□ -0.2
TRAF1-201ENST00000373887 PEX13Q92968 403 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 TAS2R3Q9NYW6 316 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 EMC3Q9P0I2 261 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 PCDHB14Q9Y5E9 798 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 VSTM5A8MXK1 200 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 HNRNPA0Q13151 305 aaKnown RBP13.8□□□□□ -0.2
TRAF1-201ENST00000373887 DCAF12L1Q5VU92 463 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 USP53Q70EK8 1073 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 IGSF8Q969P0 613 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 PNPLA2Q96AD5 504 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 SH3YL1Q96HL8 342 aaPredicted RBP13.8□□□□□ -0.2
TRAF1-201ENST00000373887 RGCCQ9H4X1 137 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 TFB2MQ9H5Q4 396 aaKnown RBP13.8□□□□□ -0.2
TRAF1-201ENST00000373887 RGPD2P0DJD1 1756 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 H7C2Y5 167 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 PRPS1L1P21108 318 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 RBM39Q14498 530 aaKnown RBP13.8□□□□□ -0.2
TRAF1-201ENST00000373887 SEMA3AQ14563 771 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 DOK4Q8TEW6 326 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 TMEM80Q96HE8 168 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 OR51B5Q9H339 312 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 TPT1P8Q9HAU6 139 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 TIGARQ9NQ88 270 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 SERTAD3Q9UJW9 196 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 A0A1W2PPK0 400 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 GSTM3P21266 225 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 S100PP25815 95 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 PITX1P78337 314 aaPredicted RBP13.8□□□□□ -0.2
TRAF1-201ENST00000373887 PON3Q15166 354 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 TIGD4Q8IY51 512 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 DCAF4L2Q8NA75 395 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 LIN28AQ9H9Z2 209 aaKnown RBP13.8□□□□□ -0.2
TRAF1-201ENST00000373887 ITM2CQ9NQX7 267 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 LGALS13Q9UHV8 139 aa13.8□□□□□ -0.2
TRAF1-201ENST00000373887 IGLON5A6NGN9 336 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 CNMDO75829 334 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 CD72P21854 359 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 MATN1P21941 496 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 DCKP27707 260 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 ZNF41P51814 821 aaPredicted RBP13.79□□□□□ -0.2
TRAF1-201ENST00000373887 SLC25A11Q02978 314 aaKnown RBP13.79□□□□□ -0.2
TRAF1-201ENST00000373887 TMEM115Q12893 351 aaPredicted RBP13.79□□□□□ -0.2
TRAF1-201ENST00000373887 DUOXA1Q1HG43 343 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 CHRFAM7AQ494W8 412 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 ATAD3CQ5T2N8 411 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 CARD17Q5XLA6 110 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 OR2T5Q6IEZ7 315 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 ZNF761Q86XN6 746 aaPredicted RBP13.79□□□□□ -0.2
TRAF1-201ENST00000373887 TTLQ8NG68 377 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 OR2T29Q8NH02 315 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 MSANTD3Q96H12 275 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 SLC25A44Q96H78 314 aaPredicted RBP13.79□□□□□ -0.2
TRAF1-201ENST00000373887 PCDH10Q9P2E7 1040 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 M0R233 179 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 THEGLP0DJG4 465 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 GLDCP23378 1020 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 ECH1Q13011 328 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 UBE2UQ5VVX9 321 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 TTC9BQ8N6N2 239 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 IL22RA1Q8N6P7 574 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 CPT1CQ8TCG5 803 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 OTUB2Q96DC9 234 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 FBXL20Q96IG2 436 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 TSSK6Q9BXA6 273 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 TMEM185BQ9H7F4 350 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 PCDHB3Q9Y5E6 796 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 BAZ2AQ9UIF9 1905 aaKnown RBP13.79□□□□□ -0.2
TRAF1-201ENST00000373887 LATO43561 262 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 SPARCP09486 303 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 HNF1BP35680 557 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 DEFB103AP81534 67 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 BOLLQ8N9W6 283 aaKnown RBP13.79□□□□□ -0.2
TRAF1-201ENST00000373887 FANK1Q8TC84 345 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 SLC30A2Q9BRI3 323 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 HCFC1R1Q9NWW0 138 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 MYH2Q9UKX2 1941 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 C11orf98E9PRG8 122 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 K7ERQ8 282 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 PLATP00750 562 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 GP1BBP13224 206 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 XRCC1P18887 633 aaPredicted RBP13.79□□□□□ -0.2
TRAF1-201ENST00000373887 PER3P56645 1201 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms