RNA–Protein interactions for RNA: ENST00000373568.6

HDAC8-205, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-205ENST00000373568 MPP2Q14168 576 aa12.38□□□□□ -0.43
HDAC8-205ENST00000373568 CASP8Q14790 479 aa12.38□□□□□ -0.43
HDAC8-205ENST00000373568 MRM1Q6IN84 353 aaKnown RBP12.38□□□□□ -0.43
HDAC8-205ENST00000373568 ATG14Q6ZNE5 492 aa12.38□□□□□ -0.43
HDAC8-205ENST00000373568 NDUFAF7Q7L592 441 aa12.38□□□□□ -0.43
HDAC8-205ENST00000373568 CROCCP2Q86T23 111 aa12.38□□□□□ -0.43
HDAC8-205ENST00000373568 GALNT16Q8N428 558 aa12.38□□□□□ -0.43
HDAC8-205ENST00000373568 ADAMTS18Q8TE60 1221 aa12.38□□□□□ -0.43
HDAC8-205ENST00000373568 RGMAQ96B86 450 aa12.38□□□□□ -0.43
HDAC8-205ENST00000373568 IMMP1LQ96LU5 166 aa12.38□□□□□ -0.43
HDAC8-205ENST00000373568 SERPINI1Q99574 410 aa12.38□□□□□ -0.43
HDAC8-205ENST00000373568 MAPKAP1Q9BPZ7 522 aa12.38□□□□□ -0.43
HDAC8-205ENST00000373568 MECRQ9BV79 373 aa12.38□□□□□ -0.43
HDAC8-205ENST00000373568 NUDT9Q9BW91 350 aa12.38□□□□□ -0.43
HDAC8-205ENST00000373568 IQCGQ9H095 443 aaKnown RBP12.38□□□□□ -0.43
HDAC8-205ENST00000373568 ELOVL6Q9H5J4 265 aa12.38□□□□□ -0.43
HDAC8-205ENST00000373568 DDX31Q9H8H2 851 aaKnown RBP12.38□□□□□ -0.43
HDAC8-205ENST00000373568 COPS7BQ9H9Q2 264 aaPredicted RBP12.38□□□□□ -0.43
HDAC8-205ENST00000373568 LYRM4Q9HD34 91 aa12.38□□□□□ -0.43
HDAC8-205ENST00000373568 NECTIN3Q9NQS3 549 aa12.38□□□□□ -0.43
HDAC8-205ENST00000373568 SPENQ96T58 3664 aaKnown RBP12.38□□□□□ -0.43
HDAC8-205ENST00000373568 IGHV3-20A0A0C4DH32 117 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 TCRBV16S1A1N1A0A5B0 115 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 MKRN2OSH3BPM6 223 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 TMPRSS11DO60235 418 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 TRIM13O60858 407 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 ENO1P06733 434 aaKnown RBP12.37□□□□□ -0.43
HDAC8-205ENST00000373568 CELA2AP08217 269 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 DHRS4L1P0CG22 281 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 NR1D1P20393 614 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 MAOAP21397 527 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 ARRB2P32121 409 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 HNRNPH2P55795 449 aaKnown RBP12.37□□□□□ -0.43
HDAC8-205ENST00000373568 GALNT1Q10472 559 aaPredicted RBP12.37□□□□□ -0.43
HDAC8-205ENST00000373568 TBL3Q12788 808 aaKnown RBP12.37□□□□□ -0.43
HDAC8-205ENST00000373568 AIMP2Q13155 320 aaKnown RBP12.37□□□□□ -0.43
HDAC8-205ENST00000373568 ABRAXAS2Q15018 415 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 AP5B1Q2VPB7 878 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 SGO1Q5FBB7 561 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 MFSD4BQ5TF39 518 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 TTC19Q6DKK2 380 aaPredicted RBP12.37□□□□□ -0.43
HDAC8-205ENST00000373568 TCTN3Q6NUS6 607 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 CPEB2Q7Z5Q1 589 aaKnown RBP12.37□□□□□ -0.43
HDAC8-205ENST00000373568 FAM47BQ8NA70 645 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 CLEC1AQ8NC01 280 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 C9orf43Q8TAL5 461 aaPredicted RBP12.37□□□□□ -0.43
HDAC8-205ENST00000373568 METTL6Q8TCB7 284 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 SELENOMQ8WWX9 145 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 HBEGFQ99075 208 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 SLC25A18Q9H1K4 315 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 ZNF552Q9H707 407 aaPredicted RBP12.37□□□□□ -0.43
HDAC8-205ENST00000373568 BRF2Q9HAW0 419 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 ZNF160Q9HCG1 818 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 MID1IP1Q9NPA3 183 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 ATP13A2Q9NQ11 1180 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 PRDM9Q9NQV7 894 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 SNX6Q9UNH7 406 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 TP53TG5Q9Y2B4 290 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 MMACHCQ9Y4U1 282 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 TIMM22Q9Y584 194 aa12.37□□□□□ -0.43
HDAC8-205ENST00000373568 NSG1A0A0A6YYJ2 146 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 SERTM1A2A2V5 107 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 H3BQF6 201 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 PSMD12O00232 456 aaPredicted RBP12.36□□□□□ -0.43
HDAC8-205ENST00000373568 PRMT3O60678 531 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 KRT6AP02538 564 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 KRT6BP04259 564 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 BPGMP07738 259 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 SFTPCP11686 197 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 HSD3B1P14060 373 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 CHN1P15882 459 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 HSD3B2P26439 372 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 TPP2P29144 1249 aaPredicted RBP12.36□□□□□ -0.43
HDAC8-205ENST00000373568 KRT6CP48668 564 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 RAP1GDS1P52306 607 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 HSD17B7P56937 341 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 ZNF33BQ06732 778 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 SLAMF1Q13291 335 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 MYBPC3Q14896 1274 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 NSDHLQ15738 373 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 CES4AQ5XG92 561 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 NUDT13Q86X67 352 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 ZNF595Q8IYB9 648 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 METTL4Q8N3J2 472 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 METTL21AQ8WXB1 218 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 PSMF1Q92530 271 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 TLCD1Q96CP7 247 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 VPS50Q96JG6 964 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 PTCHD1Q96NR3 888 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 SMAD5Q99717 465 aaKnown RBP12.36□□□□□ -0.43
HDAC8-205ENST00000373568 CENPKQ9BS16 269 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 TRMOQ9BU70 441 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 TUBB6Q9BUF5 446 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 SLC25A23Q9BV35 468 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 MRPL1Q9BYD6 325 aaKnown RBP12.36□□□□□ -0.43
HDAC8-205ENST00000373568 ACPTQ9BZG2 426 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 CENPHQ9H3R5 247 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 TMBIM4Q9HC24 238 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 PRTFDC1Q9NRG1 225 aa12.36□□□□□ -0.43
HDAC8-205ENST00000373568 RIC8BQ9NVN3 520 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms