RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 TUBP50607 506 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 GPR143P51810 404 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 CRISP1P54107 249 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 ELOA3BQ3SY89 546 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 ELOA3Q8NG57 546 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 DENND1AQ8TEH3 1009 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 FBXO32Q969P5 355 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 RBFOX1Q9NWB1 397 aaKnown RBP6.8□□□□□ -1.32
CSMD2-206ENST00000373388 CAPN5O15484 640 aaPredicted RBP6.8□□□□□ -1.32
CSMD2-206ENST00000373388 CTHP32929 405 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 OR12D2P58182 307 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 CSNK2A1P68400 391 aaPredicted RBP6.8□□□□□ -1.32
CSMD2-206ENST00000373388 CSNK2A3Q8NEV1 391 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 MGLLQ99685 303 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 CTRCQ99895 268 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 SEC22CQ9BRL7 303 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 GBA3Q9H227 469 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 ACAD8Q9UKU7 415 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 CNTNAP2Q9UHC6 1331 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 HTR1AP08908 422 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 LEPRP48357 1165 aaKnown RBP6.8□□□□□ -1.32
CSMD2-206ENST00000373388 CLCQ05315 142 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 PMPCAQ10713 525 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 PEX6Q13608 980 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 BAATQ14032 418 aaPredicted RBP6.8□□□□□ -1.32
CSMD2-206ENST00000373388 MPZL3Q6UWV2 235 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 CES3Q6UWW8 571 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 APOBEC3FQ8IUX4 373 aaKnown RBP6.8□□□□□ -1.32
CSMD2-206ENST00000373388 DNASE1L2Q92874 299 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 KIAA1143Q96AT1 154 aaPredicted RBP6.8□□□□□ -1.32
CSMD2-206ENST00000373388 SLC25A36Q96CQ1 311 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 RNF170Q96K19 258 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 ALPK2Q86TB3 2170 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 CADP27708 2225 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 TMEM221A6NGB7 291 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 FRKP42685 505 aaPredicted RBP6.8□□□□□ -1.32
CSMD2-206ENST00000373388 BAMBIQ13145 260 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 CNIH2Q6PI25 160 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 LARP4Q71RC2 724 aaKnown RBP eCLIP6.8□□□□□ -1.32
CSMD2-206ENST00000373388 OR6S1Q8NH40 331 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 GTF3C2Q8WUA4 911 aaPredicted RBP6.8□□□□□ -1.32
CSMD2-206ENST00000373388 C14orf79Q96F83 325 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 RNF157Q96PX1 679 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 WRAP53Q9BUR4 548 aaKnown RBP6.8□□□□□ -1.32
CSMD2-206ENST00000373388 PLCXD1Q9NUJ7 323 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 CPS1P31327 1500 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 CPSF4LA6NMK7 179 aaKnown RBP6.8□□□□□ -1.32
CSMD2-206ENST00000373388 SNRNP70P08621 437 aaKnown RBP6.8□□□□□ -1.32
CSMD2-206ENST00000373388 EDNRAP25101 427 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 CD86P42081 329 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 RAB1AP62820 205 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 ZACNQ401N2 412 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 MIIPQ5JXC2 388 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 ADGRF1Q5T601 910 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 ADAMTS15Q8TE58 950 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 SLC29A3Q9BZD2 475 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 GPRC5CQ9NQ84 441 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 PRDM9Q9NQV7 894 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 KLK14Q9P0G3 267 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 MYO3AQ8NEV4 1616 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 ABCC3O15438 1527 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 A0A1W2PRB8 838 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 CBX4O00257 560 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 CAPN15O75808 1086 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 PTBP3O95758 552 aaKnown RBP6.8□□□□□ -1.32
CSMD2-206ENST00000373388 HOXC6P09630 235 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 PPM1AP35813 382 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 HSPA7P48741 367 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 KCTD20Q7Z5Y7 419 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 GPAT4Q86UL3 456 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 RHOXF1Q8NHV9 184 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 TARS2Q9BW92 718 aaKnown RBP6.8□□□□□ -1.32
CSMD2-206ENST00000373388 PLA2G12BQ9BX93 195 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 MYEF2Q9P2K5 600 aaKnown RBP6.8□□□□□ -1.32
CSMD2-206ENST00000373388 TXNP10599 105 aaKnown RBP6.8□□□□□ -1.32
CSMD2-206ENST00000373388 PTBP1P26599 531 aaKnown RBP eCLIP6.8□□□□□ -1.32
CSMD2-206ENST00000373388 HNRNPA3P51991 378 aaKnown RBP6.8□□□□□ -1.32
CSMD2-206ENST00000373388 ZNF630Q2M218 657 aaPredicted RBP6.8□□□□□ -1.32
CSMD2-206ENST00000373388 UQCC3Q6UW78 93 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 CEP68Q76N32 757 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 OTOP3Q7RTS5 596 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 RAVER1Q8IY67 606 aaKnown RBP6.8□□□□□ -1.32
CSMD2-206ENST00000373388 AQP11Q8NBQ7 271 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 FKBP10Q96AY3 582 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 NLE1Q9NVX2 485 aaPredicted RBP6.8□□□□□ -1.32
CSMD2-206ENST00000373388 ABCA6Q8N139 1617 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 A0A1W2PQL4 384 aaPredicted RBP6.8□□□□□ -1.32
CSMD2-206ENST00000373388 DUXAA6NLW8 204 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 PSMD9O00233 223 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 LATO43561 262 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 SPP1P10451 314 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 CPSF6Q16630 551 aaKnown RBP eCLIP6.8□□□□□ -1.32
CSMD2-206ENST00000373388 LYRM7Q5U5X0 104 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 DOK6Q6PKX4 331 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 SLC9B2Q86UD5 537 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 PXT1Q8NFP0 134 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 SCARB1Q8WTV0 552 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 MXRA8Q9BRK3 442 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 SLC6A5Q9Y345 797 aa6.8□□□□□ -1.32
CSMD2-206ENST00000373388 COQ4Q9Y3A0 265 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms