RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 OMPP47874 163 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 VEGFCP49767 419 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 HLCSP50747 726 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 IFITM3Q01628 133 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 CLCQ05315 142 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 STX4Q12846 297 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 GFOD2Q3B7J2 385 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 ZNF789Q5FWF6 425 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 ACER2Q5QJU3 275 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 CCNYL2Q5T2Q4 361 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 SLC30A6Q6NXT4 461 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 TMEM26Q6ZUK4 368 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 KCTD8Q6ZWB6 473 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 KIAA0907Q7Z7F0 614 aaPredicted RBP7.9□□□□□ -1.14
GARNL3-201ENST00000373386 COMMD7Q86VX2 200 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 ZC3H7AQ8IWR0 971 aaKnown RBP7.9□□□□□ -1.14
GARNL3-201ENST00000373386 DDIASQ8IXT1 998 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 OR8H3Q8N146 312 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 PAPD5Q8NDF8 572 aaKnown RBP7.9□□□□□ -1.14
GARNL3-201ENST00000373386 ABHD11Q8NFV4 315 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 OR13C3Q8NGS6 347 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 STAG3L4Q8TBR4 150 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 SNX33Q8WV41 574 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 POP5Q969H6 163 aaKnown RBP7.9□□□□□ -1.14
GARNL3-201ENST00000373386 LRRC58Q96CX6 371 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 FBXL20Q96IG2 436 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 C3orf30Q96M34 536 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 KLHL15Q96M94 604 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 ADAM2Q99965 735 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 TTYH1Q9H313 450 aaPredicted RBP7.9□□□□□ -1.14
GARNL3-201ENST00000373386 ALG9Q9H6U8 611 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 ZFP14Q9HCL3 533 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 SLC52A3Q9NQ40 469 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 DUSP22Q9NRW4 184 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 TAS2R10Q9NYW0 307 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 SH3BP4Q9P0V3 963 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 EGFL7Q9UHF1 273 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 ANAPC2Q9UJX6 822 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 SCML1Q9UN30 329 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 RNF24Q9Y225 148 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 AZIN1O14977 448 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 TPST1O60507 370 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 CELF2O95319 508 aaKnown RBP7.9□□□□□ -1.14
GARNL3-201ENST00000373386 CPNE6O95741 557 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 HCKP08631 526 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 CD3GP09693 182 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 BMP1P13497 986 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 MTHFD2P13995 350 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 LBPP18428 481 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 FMO4P31512 558 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 THPOP40225 353 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 SUCLG1P53597 346 aaKnown RBP7.9□□□□□ -1.14
GARNL3-201ENST00000373386 RAD23AP54725 363 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 TMBIM6P55061 237 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 HTRA4P83105 476 aaPredicted RBP7.9□□□□□ -1.14
GARNL3-201ENST00000373386 RGS1Q08116 209 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 LCP2Q13094 533 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 MAPK11Q15759 364 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 CYP51A1Q16850 503 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 RFX4Q33E94 735 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 VPS26BQ4G0F5 336 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 LIPJQ5W064 366 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 FBXL22Q6P050 247 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 AFTPHQ6ULP2 937 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 GLB1LQ6UWU2 654 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 USP53Q70EK8 1073 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 DCXRQ7Z4W1 244 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 BTLAQ7Z6A9 289 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 PGBD5Q8N414 524 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 TWIST2Q8WVJ9 160 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 LRCH3Q96II8 777 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 OR5M11Q96RB7 305 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 TTLL2Q9BWV7 592 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 CATSPERZQ9NTU4 200 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 CA14Q9ULX7 337 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 PCDHA9Q9Y5H5 950 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 DNAJC15Q9Y5T4 150 aa7.9□□□□□ -1.14
GARNL3-201ENST00000373386 OAS3Q9Y6K5 1087 aaKnown RBP7.9□□□□□ -1.14
GARNL3-201ENST00000373386 KIAA1671Q9BY89 1806 aa7.9□□□□□ -1.15
GARNL3-201ENST00000373386 SAGE2PA6NJ88 616 aa7.89□□□□□ -1.15
GARNL3-201ENST00000373386 RFPL4AA6NLU0 287 aa7.89□□□□□ -1.15
GARNL3-201ENST00000373386 NEDD8-MDP1E9PL57 170 aa7.89□□□□□ -1.15
GARNL3-201ENST00000373386 RFPL4AL1F8VTS6 287 aa7.89□□□□□ -1.15
GARNL3-201ENST00000373386 H0YAE9 185 aa7.89□□□□□ -1.15
GARNL3-201ENST00000373386 H7C1Q1 480 aa7.89□□□□□ -1.15
GARNL3-201ENST00000373386 J3KR12 359 aa7.89□□□□□ -1.15
GARNL3-201ENST00000373386 CDC7O00311 574 aa7.89□□□□□ -1.15
GARNL3-201ENST00000373386 SIGLEC6O43699 453 aa7.89□□□□□ -1.15
GARNL3-201ENST00000373386 NOBOXO60393 691 aa7.89□□□□□ -1.15
GARNL3-201ENST00000373386 MLYCDO95822 493 aa7.89□□□□□ -1.15
GARNL3-201ENST00000373386 UGT2B4P06133 528 aa7.89□□□□□ -1.15
GARNL3-201ENST00000373386 SBK2P0C263 348 aa7.89□□□□□ -1.15
GARNL3-201ENST00000373386 HAPLN1P10915 354 aaPredicted RBP7.89□□□□□ -1.15
GARNL3-201ENST00000373386 POU1F1P28069 291 aa7.89□□□□□ -1.15
GARNL3-201ENST00000373386 IL12AP29459 219 aa7.89□□□□□ -1.15
GARNL3-201ENST00000373386 PGFP49763 221 aa7.89□□□□□ -1.15
GARNL3-201ENST00000373386 ZNF140P52738 457 aaPredicted RBP7.89□□□□□ -1.15
GARNL3-201ENST00000373386 ARPP19P56211 112 aa7.89□□□□□ -1.15
GARNL3-201ENST00000373386 MEF2AQ02078 507 aaPredicted RBP7.89□□□□□ -1.15
GARNL3-201ENST00000373386 IKZF1Q13422 519 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms