RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 MSANTD1Q6ZTZ1 278 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 C7orf57Q8NEG2 295 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 FAM46DQ8NEK8 389 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 ATP6V1C2Q8NEY4 427 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 OR4C15Q8NGM1 316 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 KLHL6Q8WZ60 621 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 UPF1Q92900 1129 aaKnown RBP eCLIP16.98■□□□□ 0.313e-9■■■■■ 38.4
VPS26A-202ENST00000373382 RAB8BQ92930 207 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 SNAPC3Q92966 411 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 C5orf58C9J3I9 102 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 UGT2B17O75795 530 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 LHCGRP22888 699 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 SDC2P34741 201 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 CSNK1DP48730 415 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 INPP1P49441 399 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 PSPHP78330 225 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 GGTA1PQ4G0N0 100 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 SHFQ7M4L6 423 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 OR7G3Q8NG95 312 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 CLP1Q92989 425 aaKnown RBP16.98■□□□□ 0.31
VPS26A-202ENST00000373382 PLD4Q96BZ4 506 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 CLIP3Q96DZ5 547 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 TSSK6Q9BXA6 273 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 MOSPD1Q9UJG1 213 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 LRFN2Q9ULH4 789 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 ZSCAN5BA6NJL1 495 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 SLC16A8O95907 504 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 IGSF6O95976 241 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 PPIBP23284 216 aaKnown RBP16.98■□□□□ 0.31
VPS26A-202ENST00000373382 ATN1P54259 1190 aaPredicted RBP16.98■□□□□ 0.31
VPS26A-202ENST00000373382 RAE1P78406 368 aaKnown RBP16.98■□□□□ 0.31
VPS26A-202ENST00000373382 C1DQ13901 141 aaKnown RBP16.98■□□□□ 0.31
VPS26A-202ENST00000373382 MBTPS1Q14703 1052 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 LARS2Q15031 903 aaKnown RBP16.98■□□□□ 0.31
VPS26A-202ENST00000373382 TRIM69Q86WT6 500 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 YIPF7Q8N8F6 280 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 C2orf69Q8N8R5 385 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 GEMIN6Q8WXD5 167 aaKnown RBP16.98■□□□□ 0.31
VPS26A-202ENST00000373382 PPCDCQ96CD2 204 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 SORBS1Q9BX66 1292 aaKnown RBP16.98■□□□□ 0.31
VPS26A-202ENST00000373382 CDCA4Q9BXL8 241 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 CORO2BQ9UQ03 480 aa16.98■□□□□ 0.31
VPS26A-202ENST00000373382 COL4A4P53420 1690 aaPredicted RBP16.98■□□□□ 0.31
VPS26A-202ENST00000373382 ANKDD1BA6NHY2 528 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 FAM25AB3EWG3 89 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 FAM25CB3EWG5 89 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 FAM25GB3EWG6 89 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 TNFRSF21O75509 655 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 ARHGEF15O94989 841 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 EOMESO95936 686 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 HBQ1P09105 142 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 CBSLP0DN79 551 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 CKBP12277 381 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 APEX1P27695 318 aaKnown RBP16.97■□□□□ 0.31
VPS26A-202ENST00000373382 GPC1P35052 558 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 CBSP35520 551 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 ALDH9A1P49189 494 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 PTSQ03393 145 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 ATAT1Q5SQI0 421 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 MLIPQ5VWP3 458 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 RBM45Q8IUH3 476 aaKnown RBP16.97■□□□□ 0.31
VPS26A-202ENST00000373382 C19orf18Q8NEA5 215 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 SUN5Q8TC36 379 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 TM9SF2Q99805 663 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 ARHGAP39Q9C0H5 1083 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 NPAP1Q9NZP6 1156 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 ARHGEF33A8MVX0 844 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 B4DXG7 233 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 ERVH48-1M5A8F1 160 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 ARHGEF9O43307 516 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 SCG5P05408 212 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 CSF3P09919 207 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 ATP1B2P14415 290 aaPredicted RBP16.97■□□□□ 0.31
VPS26A-202ENST00000373382 ASMTP46597 345 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 TAS2R50P59544 299 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 HYAL2Q12891 473 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 TARDBPQ13148 414 aaKnown RBP eCLIP16.97■□□□□ 0.31
VPS26A-202ENST00000373382 MRPL58Q14197 206 aaKnown RBP16.97■□□□□ 0.31
VPS26A-202ENST00000373382 OR2G6Q5TZ20 316 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 OTUB1Q96FW1 271 aaPredicted RBP16.97■□□□□ 0.31
VPS26A-202ENST00000373382 TMEM80Q96HE8 168 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 C3orf14Q9HBI5 128 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 MARCH5Q9NX47 278 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 NLKQ9UBE8 527 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 DKK3Q9UBP4 350 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 PCDHB7Q9Y5E2 793 aa16.97■□□□□ 0.31
VPS26A-202ENST00000373382 A0A075B6Q4 140 aa16.96■□□□□ 0.31
VPS26A-202ENST00000373382 KIR2DL3P43628 341 aa16.96■□□□□ 0.31
VPS26A-202ENST00000373382 CRTC2Q53ET0 693 aaPredicted RBP16.96■□□□□ 0.31
VPS26A-202ENST00000373382 TRIQKQ629K1 86 aa16.96■□□□□ 0.31
VPS26A-202ENST00000373382 TRIM40Q6P9F5 258 aa16.96■□□□□ 0.31
VPS26A-202ENST00000373382 ELMOD2Q8IZ81 293 aa16.96■□□□□ 0.31
VPS26A-202ENST00000373382 MAPKAP1Q9BPZ7 522 aa16.96■□□□□ 0.31
VPS26A-202ENST00000373382 RNF121Q9H920 327 aa16.96■□□□□ 0.31
VPS26A-202ENST00000373382 C12orf71A8MTZ7 269 aa16.96■□□□□ 0.31
VPS26A-202ENST00000373382 PRMT3O60678 531 aa16.96■□□□□ 0.31
VPS26A-202ENST00000373382 BCHEP06276 602 aa16.96■□□□□ 0.31
VPS26A-202ENST00000373382 KLK1P06870 262 aa16.96■□□□□ 0.31
VPS26A-202ENST00000373382 CSTF2P33240 577 aaKnown RBP eCLIP16.96■□□□□ 0.31
VPS26A-202ENST00000373382 CRYBB2P43320 205 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms