RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 LEFTY2O00292 366 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 FAAHO00519 579 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 SLITRK5O94991 958 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 PFKMP08237 780 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 HOXB9P17482 250 aaPredicted RBP11.12□□□□□ -0.63
VCL-202ENST00000372755 FXYD6P3P58550 94 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 TGFBIQ15582 683 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 MEP1AQ16819 746 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 LAS2Q8IYD9 372 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.12□□□□□ -0.632e-47■■■■□ 20.5
VCL-202ENST00000372755 TRIB3Q96RU7 358 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 PIGBOS1A0A0B4J2F0 54 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 H7C417 338 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 GJA1P17302 382 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 DPP6P42658 865 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 ENTPD1P49961 510 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 CDH15P55291 814 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 HSD11B2P80365 405 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 SLC25A11Q02978 314 aaKnown RBP11.12□□□□□ -0.63
VCL-202ENST00000372755 NKAPLQ5M9Q1 402 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 SLC15A3Q8IY34 581 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 ZNF611Q8N823 705 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 SLC2A11Q9BYW1 496 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 MAB21L2Q9Y586 359 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 UNC119BA6NIH7 251 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 H3BSA7 217 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 SMAD9O15198 467 aaKnown RBP11.12□□□□□ -0.63
VCL-202ENST00000372755 USF2Q15853 346 aaPredicted RBP11.12□□□□□ -0.63
VCL-202ENST00000372755 UAP1L1Q3KQV9 507 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 SLC36A3Q495N2 470 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 ZNF783Q6ZMS7 281 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 SLC22A8Q8TCC7 542 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 THAP4Q8WY91 577 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 C16orf58Q96GQ5 468 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 HERC2P3Q9BVR0 1158 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 TIGARQ9NQ88 270 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 B4GALT7Q9UBV7 327 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 PPM1BO75688 479 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 ITPRIPL2Q3MIP1 535 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 SHQ1Q6PI26 577 aaKnown RBP11.12□□□□□ -0.63
VCL-202ENST00000372755 ZNF584Q8IVC4 421 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 OR8S1Q8NH09 359 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 TSPEARQ8WU66 669 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 TMEM74Q96NL1 305 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.12□□□□□ -0.631e-12■■■■□ 19.7
VCL-202ENST00000372755 ZNF821O75541 412 aaPredicted RBP11.12□□□□□ -0.63
VCL-202ENST00000372755 MPC1LP0DKB6 136 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 TREML1Q86YW5 311 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 ARHGAP12Q8IWW6 846 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 ZSCAN1Q8NBB4 408 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 MR1Q95460 341 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 C17orf62Q9BQA9 187 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 PELOQ9BRX2 385 aaKnown RBP11.12□□□□□ -0.63
VCL-202ENST00000372755 NSUN3Q9H649 340 aaKnown RBP11.12□□□□□ -0.63
VCL-202ENST00000372755 KCNS2Q9ULS6 477 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 ZFR2Q9UPR6 939 aaKnown RBP11.12□□□□□ -0.63
VCL-202ENST00000372755 TEX264Q9Y6I9 313 aa11.12□□□□□ -0.63
VCL-202ENST00000372755 SOCS5O75159 536 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 SOX30O94993 753 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 IFNA5P01569 189 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 POLR2CP19387 275 aaPredicted RBP11.11□□□□□ -0.63
VCL-202ENST00000372755 EDNRBP24530 442 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 TMEM115Q12893 351 aaPredicted RBP11.11□□□□□ -0.63
VCL-202ENST00000372755 LRRN1Q6UXK5 716 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 OR8J3Q8NGG0 315 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 KLHL15Q96M94 604 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 DIRAS1O95057 198 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 CD3GP09693 182 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 ZNF45Q02386 682 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 POU4F2Q12837 409 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 HNRNPA0Q13151 305 aaKnown RBP11.11□□□□□ -0.63
VCL-202ENST00000372755 GINS1Q14691 196 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 CCL14Q16627 93 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 ZNF792Q3KQV3 632 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 HSD17B12Q53GQ0 312 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 ATG9BQ674R7 924 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 GALNT12Q8IXK2 581 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 SH3YL1Q96HL8 342 aaPredicted RBP11.11□□□□□ -0.63
VCL-202ENST00000372755 B4GALT6Q9UBX8 382 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 DHDHQ9UQ10 334 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 M0R233 179 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 GRIA2P42262 883 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 CTBP2P56545 445 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 CLCA4Q14CN2 919 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 SLC35F1Q5T1Q4 408 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 ASPGQ86U10 573 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 PDSS2Q86YH6 399 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 GALNT11Q8NCW6 608 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 MMABQ96EY8 250 aaPredicted RBP11.11□□□□□ -0.63
VCL-202ENST00000372755 RHCGQ9UBD6 479 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 H3BSH0 61 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 CCRL2O00421 344 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 EPOP01588 193 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 ERCC1P07992 297 aaPredicted RBP11.11□□□□□ -0.63
VCL-202ENST00000372755 TYRP1P17643 537 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 S100PP25815 95 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 PREPP48147 710 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 GPX6P59796 221 aa11.11□□□□□ -0.63
VCL-202ENST00000372755 RPS3AP61247 264 aaKnown RBP11.11□□□□□ -0.63
VCL-202ENST00000372755 MLC1Q15049 377 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms