RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 DAPP1Q9UN19 280 aa14.9□□□□□ -0.02
CKS1B-202ENST00000368436 MTO1Q9Y2Z2 717 aaKnown RBP14.9□□□□□ -0.02
CKS1B-202ENST00000368436 PHF3Q92576 2039 aaKnown RBP14.9□□□□□ -0.02
CKS1B-202ENST00000368436 EFCAB8A8MWE9 144 aa14.89□□□□□ -0.03
CKS1B-202ENST00000368436 CLGNO14967 610 aa14.89□□□□□ -0.03
CKS1B-202ENST00000368436 TUBB4AP04350 444 aa14.89□□□□□ -0.03
CKS1B-202ENST00000368436 TPOP07202 933 aa14.89□□□□□ -0.03
CKS1B-202ENST00000368436 RPL21P46778 160 aaKnown RBP14.89□□□□□ -0.03
CKS1B-202ENST00000368436 SLC12A2P55011 1212 aa14.89□□□□□ -0.03
CKS1B-202ENST00000368436 MTTPP55157 894 aa14.89□□□□□ -0.03
CKS1B-202ENST00000368436 KRTAP10-9P60411 292 aa14.89□□□□□ -0.03
CKS1B-202ENST00000368436 GPR85P60893 370 aa14.89□□□□□ -0.03
CKS1B-202ENST00000368436 XKR6Q5GH73 641 aa14.89□□□□□ -0.03
CKS1B-202ENST00000368436 ADNP2Q6IQ32 1131 aa14.89□□□□□ -0.03
CKS1B-202ENST00000368436 C16orf47Q6ZP98 133 aaPredicted RBP14.89□□□□□ -0.03
CKS1B-202ENST00000368436 CD163Q86VB7 1156 aa14.89□□□□□ -0.03
CKS1B-202ENST00000368436 ZBED8Q8IZ13 594 aa14.89□□□□□ -0.03
CKS1B-202ENST00000368436 SPATA6LQ8N4H0 392 aa14.89□□□□□ -0.03
CKS1B-202ENST00000368436 MARVELD2Q8N4S9 558 aa14.89□□□□□ -0.03
CKS1B-202ENST00000368436 PSD4Q8NDX1 1056 aa14.89□□□□□ -0.03
CKS1B-202ENST00000368436 OR52N2Q8NGI0 321 aa14.89□□□□□ -0.03
CKS1B-202ENST00000368436 CSF3RQ99062 836 aa14.89□□□□□ -0.03
CKS1B-202ENST00000368436 CNOT10Q9H9A5 744 aaKnown RBP14.89□□□□□ -0.03
CKS1B-202ENST00000368436 DEPPQ9NTK1 212 aa14.89□□□□□ -0.03
CKS1B-202ENST00000368436 KCMF1Q9P0J7 381 aa14.89□□□□□ -0.03
CKS1B-202ENST00000368436 MYOTQ9UBF9 498 aa14.89□□□□□ -0.03
CKS1B-202ENST00000368436 VTI1BQ9UEU0 232 aa14.89□□□□□ -0.03
CKS1B-202ENST00000368436 SNX24Q9Y343 169 aa14.89□□□□□ -0.03
CKS1B-202ENST00000368436 SAR1BQ9Y6B6 198 aa14.89□□□□□ -0.03
CKS1B-202ENST00000368436 ZNF407Q9C0G0 2248 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 PINLYPA6NC86 204 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 USP27XA6NNY8 438 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 CDC40O60508 579 aaKnown RBP eCLIP14.88□□□□□ -0.03
CKS1B-202ENST00000368436 STK16O75716 305 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 PIAS1O75925 651 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 OR2J2O76002 312 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 CCDC166P0CW27 439 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 CD1DP15813 335 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 CD22P20273 847 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 CAPN3P20807 821 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 CERS1P27544 350 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 HSPA7P48741 367 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 ATP6V0D1P61421 351 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 BMPR2Q13873 1038 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 DOC2AQ14183 400 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 E2F2Q14209 437 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 RCN2Q14257 317 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 EFTUD2Q15029 972 aaKnown RBP eCLIP14.88□□□□□ -0.03
CKS1B-202ENST00000368436 OR4D1Q15615 310 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 TMEM211Q6ICI0 200 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 SULT1C3Q6IMI6 304 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 ARHGAP11AQ6P4F7 1023 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 CLNKQ7Z7G1 428 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 GPSM1Q86YR5 675 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 MORN4Q8NDC4 146 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 PTPMT1Q8WUK0 201 aaPredicted RBP14.88□□□□□ -0.03
CKS1B-202ENST00000368436 PTCD3Q96EY7 689 aaKnown RBP14.88□□□□□ -0.03
CKS1B-202ENST00000368436 TSPAN17Q96FV3 270 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 F2RL3Q96RI0 385 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 CAB39LQ9H9S4 337 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 LIN28AQ9H9Z2 209 aaKnown RBP14.88□□□□□ -0.03
CKS1B-202ENST00000368436 WWOXQ9NZC7 414 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 PTBP2Q9UKA9 531 aaKnown RBP14.88□□□□□ -0.03
CKS1B-202ENST00000368436 ERVK-11Q9UQG0 969 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 CLCA3PQ9Y6N3 262 aa14.88□□□□□ -0.03
CKS1B-202ENST00000368436 TACC2O95359 2948 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 A8MVJ9 347 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 CXorf49A8MYA2 514 aaPredicted RBP14.87□□□□□ -0.03
CKS1B-202ENST00000368436 OR6B1O95007 311 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 IFNA16P05015 189 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 EPORP19235 508 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 SSTR1P30872 391 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 NR0B1P51843 470 aaKnown RBP14.87□□□□□ -0.03
CKS1B-202ENST00000368436 TGM3Q08188 693 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 LAPTM5Q13571 262 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 TBCCQ15814 346 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 FBXO48Q5FWF7 155 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 EMC4Q5J8M3 183 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 HSDL2Q6YN16 418 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 MEX3BQ6ZN04 569 aaKnown RBP14.87□□□□□ -0.03
CKS1B-202ENST00000368436 RGS9BPQ6ZS82 235 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 CYS1Q717R9 158 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 UBE3DQ7Z6J8 389 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 PDPRQ8NCN5 879 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 BBOF1Q8ND07 529 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 OR2M7Q8NG81 312 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 OR8K3Q8NH51 312 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 PYROXD1Q8WU10 500 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 ASB5Q8WWX0 329 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 ASB15Q8WXK1 588 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 DAZLQ92904 295 aaKnown RBP14.87□□□□□ -0.03
CKS1B-202ENST00000368436 KIAA1191Q96A73 305 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 ESAMQ96AP7 390 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 UBXN10Q96LJ8 280 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 RASL10BQ96S79 203 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 GPR22Q99680 433 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 RBBP8Q99708 897 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 EFCAB11Q9BUY7 163 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 ALOXE3Q9BYJ1 711 aa14.87□□□□□ -0.03
CKS1B-202ENST00000368436 DEFB127Q9H1M4 99 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms