RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 ERN1O75460 977 aaKnown RBP11.48□□□□□ -0.57
USF1-203ENST00000368021 KLHL18O94889 574 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 MSL3P1P0C860 447 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 COX7A2P14406 83 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 HOXB3P14651 431 aaPredicted RBP11.48□□□□□ -0.57
USF1-203ENST00000368021 TMED10P49755 219 aaKnown RBP11.48□□□□□ -0.57
USF1-203ENST00000368021 SLC7A2P52569 658 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 LIMK1P53667 647 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 PHC1P78364 1004 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 LRRC74AQ0VAA2 488 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 MED21Q13503 144 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 PDE7AQ13946 482 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 HKDC1Q2TB90 917 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 CCNYL2Q5T2Q4 361 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 FCRL6Q6DN72 434 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 FAM71E1Q6IPT2 247 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 FBXO42Q6P3S6 717 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 DHRS4L2Q6PKH6 230 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 RIPOR1Q6ZS17 1223 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 ZNF761Q86XN6 746 aaPredicted RBP11.48□□□□□ -0.57
USF1-203ENST00000368021 TMEM132CQ8N3T6 1108 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 ARL10Q8N8L6 244 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 OR2L5Q8NG80 312 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 C16orf78Q8WTQ4 265 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 ABTB1Q969K4 478 aaPredicted RBP11.48□□□□□ -0.57
USF1-203ENST00000368021 CCDC124Q96CT7 223 aaKnown RBP11.48□□□□□ -0.57
USF1-203ENST00000368021 COQ8BQ96D53 544 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 MS4A6EQ96DS6 147 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 TM4SF19Q96DZ7 209 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 ITCHQ96J02 903 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 KCNC2Q96PR1 638 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 BTBD9Q96Q07 612 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 OR2A5Q96R48 311 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 SLC38A3Q99624 504 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 SLC6A16Q9GZN6 736 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 REEP4Q9H6H4 257 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 IL1RL2Q9HB29 575 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 LHX9Q9NQ69 397 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 SERHLQ9NQF3 203 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 FAM120CQ9NX05 1096 aaKnown RBP11.48□□□□□ -0.57
USF1-203ENST00000368021 DLL3Q9NYJ7 618 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 SLAMF8Q9P0V8 285 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 SUCOQ9UBS9 1254 aaKnown RBP11.48□□□□□ -0.57
USF1-203ENST00000368021 PCDHA9Q9Y5H5 950 aa11.48□□□□□ -0.57
USF1-203ENST00000368021 GPC6Q9Y625 555 aaPredicted RBP11.48□□□□□ -0.57
USF1-203ENST00000368021 A0A1B0GTQ1 180 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 GABRR3A8MPY1 467 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 YKT6O15498 198 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 AKAP10O43572 662 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 NUDT21O43809 227 aaKnown RBP11.47□□□□□ -0.57
USF1-203ENST00000368021 DFNA5O60443 496 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 CTSVO60911 334 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 ENTPD5O75356 428 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 SERPIND1P05546 499 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 CD59P13987 128 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 HSD17B1P14061 328 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 MAPK12P53778 367 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 TAS2R50P59544 299 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 STXBP1P61764 594 aaKnown RBP11.47□□□□□ -0.57
USF1-203ENST00000368021 TRA2BP62995 288 aaKnown RBP11.47□□□□□ -0.57
USF1-203ENST00000368021 TUBA1BP68363 451 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 RGS1Q08116 209 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 CYP4F3Q08477 520 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 CAPRIN1Q14444 709 aaKnown RBP11.47□□□□□ -0.57
USF1-203ENST00000368021 SHBQ15464 509 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 PGS1Q32NB8 556 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 LRIF1Q5T3J3 769 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 CPTPQ5TA50 214 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 OR4C11Q6IEV9 310 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 NANOGP8Q6NSW7 305 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 TUBA1AQ71U36 451 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 VN1R4Q7Z5H5 301 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 UBE3DQ7Z6J8 389 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 DEFB124Q8NES8 71 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 OR7A2PQ8NGA2 310 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 OR8J3Q8NGG0 315 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 NT5CQ8TCD5 201 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 ASB9Q96DX5 294 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 ZNF764Q96H86 408 aaPredicted RBP11.47□□□□□ -0.57
USF1-203ENST00000368021 LRGUKQ96M69 825 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 ZFYVE21Q9BQ24 234 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 AICDAQ9GZX7 198 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 RAB33BQ9H082 229 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 SEMA6CQ9H3T2 930 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 OCEL1Q9H607 264 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 NANOGQ9H9S0 305 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 ATAD3AQ9NVI7 634 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 EVA1BQ9NVM1 165 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 FAF1Q9UNN5 650 aaPredicted RBP11.47□□□□□ -0.57
USF1-203ENST00000368021 BTBD3Q9Y2F9 522 aa11.47□□□□□ -0.57
USF1-203ENST00000368021 A0A096LPI6 279 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 PRORSD1PA6NEY8 169 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 NME4O00746 187 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 TM4SF5O14894 197 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 IDH3BO43837 385 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 DNAJA2O60884 412 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 SCN2BO60939 215 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 SORBS2O94875 1100 aaKnown RBP11.46□□□□□ -0.57
USF1-203ENST00000368021 GBAP04062 536 aa11.46□□□□□ -0.57
USF1-203ENST00000368021 PROS1P07225 676 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms