RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 COCHO43405 550 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 ATP6V1G1O75348 118 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 MLLT3P42568 568 aaPredicted RBP11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 VLDLRP98155 873 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 MARCH9Q86YJ5 346 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 ZBTB8BQ8NAP8 495 aaPredicted RBP11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 PHYHO14832 338 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 SCGNO76038 276 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 PVALBP20472 110 aaPredicted RBP11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 MAGEA2P43356 314 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 CLEC12AQ5QGZ9 265 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 KIAA1161Q6NSJ0 714 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 MMAAQ8IVH4 418 aaKnown RBP11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 MS4A15Q8N5U1 240 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 LRRC20Q8TCA0 184 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 ING5Q8WYH8 240 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 SLC6A15Q9H2J7 730 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 MYNNQ9NPC7 610 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 CARD8Q9Y2G2 431 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 A0A0D9SEW6 157 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 CASRP41180 1078 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 DIO3P55073 304 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 CXCR4P61073 352 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 ABCA11PQ4W5N1 156 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 C4orf46Q504U0 113 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 ARHGAP11AQ6P4F7 1023 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 SERPINA11Q86U17 422 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 ESAMQ96AP7 390 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 TRMT61BQ9BVS5 477 aaKnown RBP11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 TAS2R10Q9NYW0 307 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 TAS2R8Q9NYW2 309 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 ASB4Q9Y574 426 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 DDX60LQ5H9U9 1706 aaKnown RBP11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 TAZQ16635 292 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 MRPL10Q7Z7H8 261 aaKnown RBP11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 OR56A3Q8NH54 315 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 FBXL20Q96IG2 436 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 POTEKPQ9BYX7 375 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 BRWD1Q9NSI6 2320 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 IFNA21P01568 189 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 GPR68Q15743 365 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 CHERPQ8IWX8 916 aaKnown RBP11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 FAM86B1Q8N7N1 296 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 DRAXINQ8NBI3 349 aaPredicted RBP11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 MUS81Q96NY9 551 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 HTR1AP08908 422 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 GPR143P51810 404 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 KEAP1Q14145 624 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 CMTM8Q8IZV2 173 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 YIPF7Q8N8F6 280 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 C11orf49Q9H6J7 331 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 FAM118AQ9NWS6 357 aa11.58□□□□□ -0.56
CDC42BPA-203ENST00000366766 EMC8O43402 210 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 PROM1O43490 865 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 TPST2O60704 377 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 MT-ND2P03891 347 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 ARL9Q6T311 187 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 THAP6Q8TBB0 222 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 JRKO75564 520 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 C6orf47O95873 294 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 OR8H3Q8N146 312 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 KCNA7Q96RP8 456 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 IGFBP4P22692 258 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 OR52E8Q6IFG1 317 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 KCTD18Q6PI47 426 aaPredicted RBP11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 ERN2Q76MJ5 926 aaKnown RBP11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 PCTPQ9UKL6 214 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 DNAJC15Q9Y5T4 150 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 SAP18O00422 153 aaKnown RBP11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 UGT2B10P36537 528 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 SLC22A10Q63ZE4 541 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 C14orf80Q86SX3 495 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 HERC2P3Q9BVR0 1158 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 GKN1Q9NS71 199 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 G3V2L1 256 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 CENPSQ8N2Z9 138 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 NEIL3Q8TAT5 605 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 B4GALT6Q9UBX8 382 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 ADAMTS7Q9UKP4 1686 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 ZNF208O43345 1280 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 HOXA11P31270 313 aaPredicted RBP11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 SLC9A3P48764 834 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 RAB30Q15771 203 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 ZNF395Q9H8N7 513 aaPredicted RBP11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 FOLH1BQ9HBA9 442 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 EME2A4GXA9 379 aaPredicted RBP11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 LEFTY2O00292 366 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 AGXTP21549 392 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 C2orf73Q8N5S3 287 aaPredicted RBP11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 RFT1Q96AA3 541 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 RHBDF1Q96CC6 855 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 TSSK6Q9BXA6 273 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 MARCH7Q9H992 704 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 AMBNQ9NP70 447 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 ZNF224Q9NZL3 707 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 PAPPAQ13219 1627 aa11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 SCAMP2O15127 329 aaKnown RBP11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 SLC10A2Q12908 348 aaPredicted RBP11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 PUS10Q3MIT2 529 aaKnown RBP11.57□□□□□ -0.56
CDC42BPA-203ENST00000366766 GRHL2Q6ISB3 625 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms