RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 TRBC2A0A5B9 178 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 TNFRSF21O75509 655 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 CSF2P04141 144 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 ZNF24P17028 368 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 HNMTP50135 292 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 SNRPD1P62314 119 aaKnown RBP10.11□□□□□ -0.79
SMC3-201ENST00000361804 CDC20Q12834 499 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 NOGQ13253 232 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 ZNF181Q2M3W8 571 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 SLC34A3Q8N130 599 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 C2orf15Q8WU43 125 aaKnown RBP10.11□□□□□ -0.79
SMC3-201ENST00000361804 COL21A1Q96P44 957 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 TRNT1Q96Q11 434 aaKnown RBP10.11□□□□□ -0.79
SMC3-201ENST00000361804 SP140LQ9H930 580 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 FKBP14Q9NWM8 211 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 GULP1Q9UBP9 304 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 KLHL3Q9UH77 587 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 INSL5Q9Y5Q6 135 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 ANTXRLA6NF34 631 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 K7ESM1 405 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 ARHGEF15O94989 841 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 GADD45GO95257 159 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 CDK6Q00534 326 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 SLAMF1Q13291 335 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 SLBPQ14493 270 aaKnown RBP eCLIP10.11□□□□□ -0.79
SMC3-201ENST00000361804 GRIN2CQ14957 1233 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 SPANXN2Q5MJ10 180 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 SZRD1Q7Z422 152 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 GPR65Q8IYL9 337 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 PGBD3Q8N328 593 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 CBARPQ8N350 705 aaPredicted RBP10.11□□□□□ -0.79
SMC3-201ENST00000361804 FCRL1Q96LA6 429 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 OPALINQ96PE5 141 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 SLX1AQ9BQ83 275 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 TMEM175Q9BSA9 504 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 PRR14Q9BWN1 585 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 CEP44Q9C0F1 390 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 ZDHHC4Q9NPG8 344 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 TBC1D14Q9P2M4 693 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 CARD8Q9Y2G2 431 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 N6AMT1Q9Y5N5 214 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 BACE2Q9Y5Z0 518 aa10.11□□□□□ -0.79
SMC3-201ENST00000361804 ADAMDEC1O15204 470 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 DYRK3O43781 588 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 TIA1P31483 386 aaKnown RBP eCLIP10.1□□□□□ -0.79
SMC3-201ENST00000361804 UGT2B10P36537 528 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 OR2B6P58173 313 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 TBPL1P62380 186 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 MESP2Q0VG99 397 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 CNTN1Q12860 1018 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 ATAD3CQ5T2N8 411 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 GCNT6Q5T4J0 391 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 COMTD1Q86VU5 262 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 CHTF18Q8WVB6 975 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 TRMT2BQ96GJ1 504 aaKnown RBP10.1□□□□□ -0.79
SMC3-201ENST00000361804 CEP19Q96LK0 163 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 FAM83DQ9H4H8 585 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 HHATLQ9HCP6 504 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 NPC1O15118 1278 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 LEFTY1O75610 366 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 MED26O95402 600 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 URODP06132 367 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 TUBA1BP68363 451 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 ARSIQ5FYB1 569 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 LIPKQ5VXJ0 399 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 TMEM215Q68D42 235 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 ZNF783Q6ZMS7 281 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 TUBA1AQ71U36 451 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 SHFQ7M4L6 423 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 NLRP8Q86W28 1048 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 LACC1Q8IV20 430 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 OR4D11Q8NGI4 311 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 ZNF480Q8WV37 535 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 CLP1Q92989 425 aaKnown RBP10.1□□□□□ -0.79
SMC3-201ENST00000361804 MCCC1Q96RQ3 725 aaPredicted RBP10.1□□□□□ -0.79
SMC3-201ENST00000361804 C1GALT1Q9NS00 363 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 H3BN98 237 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 PLD2O14939 933 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 BCHEP06276 602 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 IL3P08700 152 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 ALDH9A1P49189 494 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 CSTF3Q12996 717 aaKnown RBP10.1□□□□□ -0.79
SMC3-201ENST00000361804 MTA1Q13330 715 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 LIPJQ5W064 366 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 VASH1Q7L8A9 365 aaPredicted RBP10.1□□□□□ -0.79
SMC3-201ENST00000361804 TAGAPQ8N103 731 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 SLC39A11Q8N1S5 342 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 SYT14Q8NB59 555 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 ASZ1Q8WWH4 475 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 TMEM159Q96B96 161 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 TRIM43Q96BQ3 446 aaPredicted RBP10.1□□□□□ -0.79
SMC3-201ENST00000361804 ECHDC3Q96DC8 303 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 ASPNQ9BXN1 380 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 ZNF556Q9HAH1 456 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 SLAMF7Q9NQ25 335 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 MALT1Q9UDY8 824 aa10.1□□□□□ -0.79
SMC3-201ENST00000361804 ALDH1A1P00352 501 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 HNF4AP41235 474 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 RFX2P48378 723 aa10.09□□□□□ -0.79
SMC3-201ENST00000361804 LIMK1P53667 647 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms