RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 TEX261Q6UWH6 196 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 ZNF551Q7Z340 670 aaPredicted RBP12.18□□□□□ -0.46
VAMP1-201ENST00000361716 RDH10Q8IZV5 341 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 AQP11Q8NBQ7 271 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 SLAIN1Q8ND83 568 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.18□□□□□ -0.46
VAMP1-201ENST00000361716 CD200R1Q8TD46 325 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 ST8SIA4Q92187 359 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 ART5Q96L15 291 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 NIPAL2Q9H841 368 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 C3orf14Q9HBI5 128 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 U3KQ87 197 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 MAGEB17A8MXT2 336 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 SAP18O00422 153 aaKnown RBP12.18□□□□□ -0.46
VAMP1-201ENST00000361716 PCDH17O14917 1159 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 PBLDP30039 288 aaPredicted RBP12.18□□□□□ -0.46
VAMP1-201ENST00000361716 PER3P56645 1201 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 DOC2BQ14184 412 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 TCTE3Q8IZS6 198 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 USP7Q93009 1102 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 HHATLQ9HCP6 504 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 KLHL21Q9UJP4 597 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 BAIAP2Q9UQB8 552 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 NEUROG3Q9Y4Z2 214 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 TRPV2Q9Y5S1 764 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 LCTP09848 1927 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 TMEM88BA6NKF7 163 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 K7ERQ8 282 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 TRAPPC2P0DI81 140 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 TRAPPC2BP0DI82 140 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 ZNF7P17097 686 aaPredicted RBP12.18□□□□□ -0.46
VAMP1-201ENST00000361716 EXOSC2Q13868 293 aaKnown RBP12.18□□□□□ -0.46
VAMP1-201ENST00000361716 NCF4Q15080 339 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 ATAT1Q5SQI0 421 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 KIAA1841Q6NSI8 718 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 KIAA1324Q6UXG2 1013 aaKnown RBP12.18□□□□□ -0.46
VAMP1-201ENST00000361716 UMODL1-AS1Q8N2C9 162 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 GDPD1Q8N9F7 314 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 LMNTD1Q8N9Z9 388 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 TMEM80Q96HE8 168 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 OPALINQ96PE5 141 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 PKP4Q99569 1192 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 NUDT15Q9NV35 164 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 HCSTQ9UBK5 93 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 RAB23Q9ULC3 237 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 FZD4Q9ULV1 537 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 TLR6Q9Y2C9 796 aa12.18□□□□□ -0.46
VAMP1-201ENST00000361716 KIAA0100Q14667 2235 aaKnown RBP12.18□□□□□ -0.46
VAMP1-201ENST00000361716 GTPBP1O00178 669 aaKnown RBP12.17□□□□□ -0.46
VAMP1-201ENST00000361716 SIGLEC5O15389 551 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 ETV6P41212 452 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 CLCN4P51793 760 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 ERVFC1P60507 584 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.17□□□□□ -0.46
VAMP1-201ENST00000361716 CRYZQ08257 329 aaKnown RBP12.17□□□□□ -0.46
VAMP1-201ENST00000361716 SIGLEC14Q08ET2 396 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 COX10Q12887 443 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 TUSC3Q13454 348 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 GDF6Q6KF10 455 aaPredicted RBP12.17□□□□□ -0.46
VAMP1-201ENST00000361716 KANSL1Q7Z3B3 1105 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 PIAS4Q8N2W9 510 aaPredicted RBP12.17□□□□□ -0.46
VAMP1-201ENST00000361716 TCEANCQ8N8B7 351 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 MARC2Q969Z3 335 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 GDF15Q99988 308 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 TMED9Q9BVK6 235 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 FBXO44Q9H4M3 255 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 TVP23BQ9NYZ1 205 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 ARID1BQ8NFD5 2236 aaPredicted RBP12.17□□□□□ -0.46
VAMP1-201ENST00000361716 ANKRD66B4E2M5 251 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 RFXAPO00287 272 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 SLC28A1O00337 649 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 STK16O75716 305 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 ALDH1A1P00352 501 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 ALPPP05187 535 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 OGNP20774 298 aaKnown RBP12.17□□□□□ -0.46
VAMP1-201ENST00000361716 ANGPT1Q15389 498 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.17□□□□□ -0.46
VAMP1-201ENST00000361716 PLAG1Q6DJT9 500 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 TMEM81Q6P7N7 255 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 CASP12Q6UXS9 341 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 TPGS1Q6ZTW0 290 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 ADGRG2Q8IZP9 1017 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 OR52P1PQ8NH57 321 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 OR5AK3PQ8NH89 298 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 COQ8AQ8NI60 647 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 KCNH6Q9H252 994 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 CPNE7Q9UBL6 633 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 UNC80Q8N2C7 3258 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 TRIP12Q14669 1992 aaPredicted RBP12.17□□□□□ -0.46
VAMP1-201ENST00000361716 A0A075B6Q4 140 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 WNT9AO14904 365 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 RPIAP49247 311 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 SLC11A2P49281 568 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 CTSL3PQ5NE16 218 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 SPOUT1Q5T280 376 aaKnown RBP12.17□□□□□ -0.46
VAMP1-201ENST00000361716 OR2G6Q5TZ20 316 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 PRSS42Q7Z5A4 293 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 HMGN2P46Q86SG4 172 aa12.17□□□□□ -0.46
VAMP1-201ENST00000361716 C2orf73Q8N5S3 287 aaPredicted RBP12.17□□□□□ -0.46
VAMP1-201ENST00000361716 IQCF1Q8N6M8 205 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms