RNA–Protein interactions for RNA: ENST00000360540.9

PCMTD1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCMTD1, Length 4,252 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-201ENST00000360540 ODF4Q2M2E3 257 aa13.52□□□□□ -0.25
PCMTD1-201ENST00000360540 USP43Q70EL4 1123 aa13.52□□□□□ -0.25
PCMTD1-201ENST00000360540 SHFQ7M4L6 423 aa13.52□□□□□ -0.25
PCMTD1-201ENST00000360540 HDDC2Q7Z4H3 204 aa13.52□□□□□ -0.25
PCMTD1-201ENST00000360540 ELL3Q9HB65 397 aaPredicted RBP13.52□□□□□ -0.25
PCMTD1-201ENST00000360540 ACOT8O14734 319 aa13.52□□□□□ -0.25
PCMTD1-201ENST00000360540 MPZL2O60487 215 aa13.52□□□□□ -0.25
PCMTD1-201ENST00000360540 SLC3A1Q07837 685 aa13.52□□□□□ -0.25
PCMTD1-201ENST00000360540 NFATC3Q12968 1075 aa13.52□□□□□ -0.25
PCMTD1-201ENST00000360540 SLAMF1Q13291 335 aa13.52□□□□□ -0.25
PCMTD1-201ENST00000360540 RANBP3LQ86VV4 465 aaPredicted RBP13.52□□□□□ -0.25
PCMTD1-201ENST00000360540 VRK3Q8IV63 474 aa13.52□□□□□ -0.25
PCMTD1-201ENST00000360540 ZNF740Q8NDX6 193 aa13.52□□□□□ -0.25
PCMTD1-201ENST00000360540 RPRD1BQ9NQG5 326 aaKnown RBP13.52□□□□□ -0.25
PCMTD1-201ENST00000360540 MKLN1Q9UL63 735 aa13.52□□□□□ -0.25
PCMTD1-201ENST00000360540 WDR45Q9Y484 360 aa13.52□□□□□ -0.25
PCMTD1-201ENST00000360540 A0A075B6Q4 140 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 C2orf92A0A1B0GVN3 265 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 CCDC85CA6NKD9 419 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 MCIDASD6RGH6 385 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 NOS1APO75052 506 aaPredicted RBP13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 CTSAP10619 480 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 CELP19835 753 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 DDX6P26196 483 aaKnown RBP eCLIP13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 MARCH9Q86YJ5 346 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 IQCF1Q8N6M8 205 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 BIRC8Q96P09 236 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 CLDN4O14493 209 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 ZNF195O14628 629 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 SLC5A2P31639 672 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 KHDRBS2Q5VWX1 349 aaKnown RBP13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 OR51A7Q8NH64 312 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 ZNF675Q8TD23 568 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 FCGR1BQ92637 280 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 ZDHHC7Q9NXF8 308 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 POLR2AP24928 1970 aaKnown RBP13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 A0A1W2PPK0 400 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 FAM92AA1XBS5 289 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 A8MU76 341 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 HOXD8P13378 290 aaPredicted RBP13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 CDH11P55287 796 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 UBXN2BQ14CS0 331 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 FAAH2Q6GMR7 532 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 TMEM107Q6UX40 140 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 WDR53Q7Z5U6 358 aaPredicted RBP13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 TEX26Q8N6G2 289 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 FAM86B1Q8N7N1 296 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 TMEM102Q8N9M5 508 aaPredicted RBP13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 GATSQ8NAP1 163 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 UFD1Q92890 307 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 PAK1IP1Q9NWT1 392 aaPredicted RBP13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 TUBA8Q9NY65 449 aaPredicted RBP13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 GPR52Q9Y2T5 361 aa13.51□□□□□ -0.25
PCMTD1-201ENST00000360540 ANHXE9PGG2 379 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 OR7A17O14581 309 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 GSRP00390 522 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 RLN1P04808 185 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 SBK3P0C264 359 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 PSKH1P11801 424 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 ZNF26P17031 533 aaPredicted RBP13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 PPP2R2BQ00005 443 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 CSTF1Q05048 431 aaKnown RBP13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 PIN1Q13526 163 aaPredicted RBP13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 MYBPC3Q14896 1274 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 SCML4Q8N228 414 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 SLC15A4Q8N697 577 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 RFKQ969G6 155 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 CLEC4MQ9H2X3 399 aaPredicted RBP13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 NEUROD4Q9HD90 331 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 BRD7Q9NPI1 651 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 ABCG2Q9UNQ0 655 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 CFL2Q9Y281 166 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 KHDRBS3O75525 346 aaKnown RBP13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 MRPL3P09001 348 aaKnown RBP13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 SIM1P81133 766 aaPredicted RBP13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 LGALS3BPQ08380 585 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 CLCA4Q14CN2 919 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 TAF13Q15543 124 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 ZNF544Q6NX49 715 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 NXPE4Q6UWF7 544 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 FAM180AQ6UWF9 173 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 DCP2Q8IU60 420 aaKnown RBP13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 C5orf34Q96MH7 638 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 TRNT1Q96Q11 434 aaKnown RBP13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 ZNF221Q9UK13 617 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 SAGE2PA6NJ88 616 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 RPP14O95059 124 aaKnown RBP13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 PSMB5P28074 263 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 KCNC4Q03721 635 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 GRSF1Q12849 480 aaKnown RBP eCLIP13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 SUZ12Q15022 739 aaKnown RBP13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 CCSMST1Q4G0I0 132 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 COQ5Q5HYK3 327 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 SBSNQ6UWP8 590 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 OR51G2Q8NGK0 314 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 TMEM19Q96HH6 336 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 MCHR1Q99705 422 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 LTB4R2Q9NPC1 389 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 GABRR3A8MPY1 467 aa13.5□□□□□ -0.25
PCMTD1-201ENST00000360540 H3BMQ9 156 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms