RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 KLK13Q9UKR3 277 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 PADI4Q9UM07 663 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 L3MBTL1Q9Y468 752 aa13.16□□□□□ -0.3
PDLIM5-203ENST00000359265 FREM2Q5SZK8 3169 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 IGHV1OR21-1A0A087WYE8 117 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 A0A0G2JN53 185 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 LNP1A1A4G5 178 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 SLC9B1P1A6NJY1 282 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 C4orf47A7E2U8 309 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 GABRR3A8MPY1 467 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 H0YGG7 62 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 NME4O00746 187 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 TBX19O60806 448 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 KLHL18O94889 574 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 SCELO95171 688 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 ANP32DO95626 131 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 PRB1P04280 392 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 PIM1P11309 404 aaPredicted RBP13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 PNLIPP16233 465 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 ZNF10P21506 573 aaPredicted RBP13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 HIST1H1TP22492 207 aaPredicted RBP13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 ATP5A1P25705 553 aaKnown RBP13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 TRPC1P48995 793 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 DUSP3P51452 185 aaPredicted RBP13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 EEFSECP57772 596 aaKnown RBP13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 ARF3P61204 181 aaPredicted RBP13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 PHC1P78364 1004 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 CEACAM7Q14002 265 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 KPNB1Q14974 876 aaKnown RBP13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 HEPACAMQ14CZ8 416 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 MANEAQ5SRI9 462 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 LRIF1Q5T3J3 769 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 DLEU7Q6UYE1 221 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 DNAJC14Q6Y2X3 702 aaPredicted RBP13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 FAM92BQ6ZTR7 304 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 SLC15A3Q8IY34 581 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 CARFQ8N187 725 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 NATD1Q8N6N6 113 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 OR8J3Q8NGG0 315 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 DNAJB14Q8TBM8 379 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 WDR60Q8WVS4 1066 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 NCSTNQ92542 709 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 NAT6Q93015 286 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 TMEM125Q96AQ2 219 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 TM4SF18Q96CE8 201 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 TCTN2Q96GX1 697 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 ZNF764Q96H86 408 aaPredicted RBP13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 TGM7Q96PF1 710 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 GBP5Q96PP8 586 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 TEFMQ96QE5 360 aaKnown RBP13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 MAP3K3Q99759 626 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 SH3GL1Q99961 368 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 MACROD1Q9BQ69 325 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 FAIM2Q9BWQ8 316 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 PRDM7Q9NQW5 492 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 LYARQ9NX58 379 aaKnown RBP13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 BTNL2Q9UIR0 455 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 PACSIN3Q9UKS6 424 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 EXO1Q9UQ84 846 aaKnown RBP13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 POMPQ9Y244 141 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 AP3M1Q9Y2T2 418 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 PCDHA9Q9Y5H5 950 aa13.15□□□□□ -0.3
PDLIM5-203ENST00000359265 ASXL3Q9C0F0 2248 aa13.15□□□□□ -0.31
PDLIM5-203ENST00000359265 COL5A1P20908 1838 aaPredicted RBP13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 C4orf51C9J302 202 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 RNASET2O00584 256 aaKnown RBP13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 TXNDC9O14530 226 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 RFXANKO14593 260 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 ZSCAN9O15535 394 aaPredicted RBP13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 P2RX6O15547 441 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 FLRT2O43155 660 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 MAP3K7O43318 606 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 SIGLEC6O43699 453 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 TMPRSS11DO60235 418 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 DNAJA2O60884 412 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 STAMBPO95630 424 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 FAM58BPP0C7Q3 252 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 ZNF888P0CJ79 500 aaPredicted RBP13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 LAMP1P11279 417 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 DDCP20711 480 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 MLLT3P42568 568 aaPredicted RBP13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 GRK6P43250 576 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 GFERP55789 205 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 WNT3P56703 355 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 OR1D5P58170 312 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 RAB8AP61006 207 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 ACTR3P61158 418 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 PLIN5Q00G26 463 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 SLC9A5Q14940 896 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 FRMPD2BQ6IN97 320 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 ANKRD26P1Q6NSI1 321 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 ZNF793Q6ZN11 406 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 ABHD13Q7L211 337 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 ANKRD46Q86W74 232 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 PLXDC1Q8IUK5 500 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 EID2Q8N6I1 236 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 CSNK1A1LQ8N752 337 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 ACOT4Q8N9L9 421 aa13.14□□□□□ -0.31
PDLIM5-203ENST00000359265 KCT2Q8NC54 265 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms