RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 PDYNP01213 254 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 SYPP08247 313 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 EEFSECP57772 596 aaKnown RBP7.07□□□□□ -1.28
VPS13A-202ENST00000357409 RASGEF1BQ0VAM2 473 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 WDR45BQ5MNZ6 344 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 FRG2Q64ET8 278 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 ZFP1Q6P2D0 407 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 TRILQ7L0X0 811 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 OR4K14Q8NGD5 310 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 SLC35F5Q8WV83 523 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 FRG2BQ96QU4 278 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 HDHD5Q9BXW7 423 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 ZNF717Q9BY31 904 aaPredicted RBP7.07□□□□□ -1.28
VPS13A-202ENST00000357409 CWH43Q9H720 699 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 AASSQ9UDR5 926 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 RHBDD3Q9Y3P4 386 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 EDDM13A0A1B0GTR0 161 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 CAPGP40121 348 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 AP1S1P61966 158 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 SLC22A18Q96BI1 424 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 TOE1Q96GM8 510 aaKnown RBP7.07□□□□□ -1.28
VPS13A-202ENST00000357409 TUBGCP5Q96RT8 1024 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 TREM1Q9NP99 234 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 ZNF639Q9UID6 485 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 AP1M2Q9Y6Q5 423 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 IGHV3-20A0A0C4DH32 117 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 C2orf74A8MZ97 194 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 PAPSS2O95340 614 aaPredicted RBP7.07□□□□□ -1.28
VPS13A-202ENST00000357409 SLC10A2Q12908 348 aaPredicted RBP7.07□□□□□ -1.28
VPS13A-202ENST00000357409 PIK3R3Q92569 461 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 MCHR1Q99705 422 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 GGT3PA6NGU5 568 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 CD36P16671 472 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 RGS6P49758 472 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 GAS6Q14393 721 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 MAD2L1BPQ15013 274 aaPredicted RBP7.07□□□□□ -1.28
VPS13A-202ENST00000357409 NPTX1Q15818 432 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 PCYT2Q99447 389 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 L2HGDHQ9H9P8 463 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 CLK4Q9HAZ1 481 aaKnown RBP7.07□□□□□ -1.28
VPS13A-202ENST00000357409 NUDT4Q9NZJ9 180 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 SLC9B1P1A6NJY1 282 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 DHFRP00374 187 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 RPS21P63220 83 aaKnown RBP7.07□□□□□ -1.28
VPS13A-202ENST00000357409 MERTKQ12866 999 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 MLC1Q15049 377 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 TANGO2Q6ICL3 276 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 PYHIN1Q6K0P9 492 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 PLET1Q6UQ28 207 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 ZNF572Q7Z3I7 529 aaPredicted RBP7.07□□□□□ -1.28
VPS13A-202ENST00000357409 TMEM151AQ8N4L1 468 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 NELFAQ9H3P2 528 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 MARCH4Q9P2E8 410 aaPredicted RBP7.07□□□□□ -1.28
VPS13A-202ENST00000357409 PCDHGC3Q9UN70 934 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 BCORL1Q5H9F3 1711 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 FXYD6-FXYD2A0A087WZ82 144 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 PGRP06401 933 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 IL3P08700 152 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 C6P13671 934 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 DIO3P55073 304 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 UBE2NP61088 152 aaKnown RBP7.07□□□□□ -1.28
VPS13A-202ENST00000357409 DECR1Q16698 335 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 MCATQ8IVS2 390 aaKnown RBP7.07□□□□□ -1.28
VPS13A-202ENST00000357409 OR2T34Q8NGX1 318 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 OR2T3Q8NH03 318 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 SLC5A11Q8WWX8 675 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 FXYD6Q9H0Q3 95 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 POLR2J3Q9H1A7 115 aaKnown RBP7.07□□□□□ -1.28
VPS13A-202ENST00000357409 TRPV4Q9HBA0 871 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 MAGEE1Q9HCI5 957 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 ZNF180Q9UJW8 692 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 PLEKHM1Q9Y4G2 1056 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 AHSA1O95433 338 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 CHRM4P08173 479 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 NTSR1P30989 418 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 IRS1P35568 1242 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 MAGEA12P43365 314 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 WNT7BP56706 349 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 TIGD6Q17RP2 521 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 FIGLAQ6QHK4 219 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 PGAM5Q96HS1 289 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 NARFLQ9H6Q4 476 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 SP140LQ9H930 580 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 COL1A2P08123 1366 aa7.07□□□□□ -1.28
VPS13A-202ENST00000357409 EFCAB7A8K855 629 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 S100A6P06703 90 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 SPINK2P20155 84 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 CHMP24386 653 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 PBX2P40425 430 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 CDK6Q00534 326 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 CERS6Q6ZMG9 384 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 NAT8LQ8N9F0 302 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 SEC14L1Q92503 715 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 C16orf70Q9BSU1 422 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 ST6GALNAC5Q9BVH7 336 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 GPR88Q9GZN0 384 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 RNPEPL1Q9HAU8 725 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 ZNF282Q9UDV7 671 aaPredicted RBP7.06□□□□□ -1.28
VPS13A-202ENST00000357409 ABCG2Q9UNQ0 655 aa7.06□□□□□ -1.28
VPS13A-202ENST00000357409 ST14Q9Y5Y6 855 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms