RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 CAMKVQ8NCB2 501 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 OR51Q1Q8NH59 317 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 PROKR1Q8TCW9 393 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 NKD1Q969G9 470 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 CLIP3Q96DZ5 547 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 TAAR9Q96RI9 348 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 SPSB2Q99619 263 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 SOX17Q9H6I2 414 aaPredicted RBP3.8□□□□□ -1.8
LIG4-201ENST00000356922 BRF2Q9HAW0 419 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 LRTM1Q9HBL6 345 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 SLC52A3Q9NQ40 469 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 LANCL2Q9NS86 450 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 SLC6A13Q9NSD5 602 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 SLAMF8Q9P0V8 285 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 ARMCX1Q9P291 453 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 CES1P1Q9UKY3 287 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 DAPP1Q9UN19 280 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 PCDHB3Q9Y5E6 796 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 GPR45Q9Y5Y3 372 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 IGHV3-20A0A0C4DH32 117 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 GABRR3A8MPY1 467 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 NVLO15381 856 aaKnown RBP3.8□□□□□ -1.8
LIG4-201ENST00000356922 B4GALT2O60909 372 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 FKBP9O95302 570 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 BMP10O95393 424 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 CHEK2O96017 543 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 IL3P08700 152 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 PIM1P11309 404 aaPredicted RBP3.8□□□□□ -1.8
LIG4-201ENST00000356922 XCR1P46094 333 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 GTF2A1P52655 376 aaPredicted RBP3.8□□□□□ -1.8
LIG4-201ENST00000356922 DGKQP52824 942 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 SHC2P98077 582 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 ABHD18Q0P651 414 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 FAM53BQ14153 422 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 GRM7Q14831 915 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 RTP5Q14D33 572 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 NKAIN1Q4KMZ8 207 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 FAAH2Q6GMR7 532 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 MRPL14Q6P1L8 145 aaKnown RBP3.8□□□□□ -1.8
LIG4-201ENST00000356922 GALNT18Q6P9A2 607 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 FAM198BQ6UWH4 519 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 LANCL3Q6ZV70 420 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 CHSY3Q70JA7 882 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 RIMKLAQ8IXN7 391 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 CLEC4FQ8N1N0 589 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 FNDC5Q8NAU1 212 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 OR7A2PQ8NGA2 310 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 CDC26Q8NHZ8 85 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 TSLPQ969D9 159 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 PPWD1Q96BP3 646 aaKnown RBP3.8□□□□□ -1.8
LIG4-201ENST00000356922 C8orf44Q96CB5 159 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 CRELD1Q96HD1 420 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 CATSPER2Q96P56 530 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 CENPKQ9BS16 269 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 NDC1Q9BTX1 674 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 EPN3Q9H201 632 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 FANCEQ9HB96 536 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 C1orf109Q9NX04 203 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 PCDHGA8Q9Y5G5 932 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 PCDHGA3Q9Y5H0 932 aa3.8□□□□□ -1.8
LIG4-201ENST00000356922 UTP20O75691 2785 aaKnown RBP3.8□□□□□ -1.8
LIG4-201ENST00000356922 A0A1B0GX78 115 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 ASPDHA6ND91 283 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 FGF17O60258 216 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 ALOX12BO75342 701 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 TGDSO95455 350 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 AIFM1O95831 613 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 ANXA4P09525 319 aaPredicted RBP3.79□□□□□ -1.8
LIG4-201ENST00000356922 FAM58BPP0C7Q3 252 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 PRPH2P23942 346 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 SSR2P43308 183 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 KLC1Q07866 573 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 NKG7Q16617 165 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 UGT8Q16880 541 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 IMPG1Q17R60 797 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 TCTE1Q5JU00 501 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 CCNYL2Q5T2Q4 361 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 NDUFAF5Q5TEU4 345 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 MFSD4BQ5TF39 518 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 NXNQ6DKJ4 435 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 TREML1Q86YW5 311 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 CACTIN-AS1Q8N1I8 211 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 LIX1Q8N485 282 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 ZNF321PQ8N8H1 164 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 GBP7Q8N8V2 638 aaPredicted RBP3.79□□□□□ -1.8
LIG4-201ENST00000356922 STT3BQ8TCJ2 826 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 C16orf78Q8WTQ4 265 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 GATA6Q92908 595 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 GAL3ST3Q96A11 431 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 CIDECQ96AQ7 238 aaPredicted RBP3.79□□□□□ -1.8
LIG4-201ENST00000356922 RGMAQ96B86 450 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 ANKRD9Q96BM1 317 aaPredicted RBP3.79□□□□□ -1.8
LIG4-201ENST00000356922 CNRIP1Q96F85 164 aaPredicted RBP3.79□□□□□ -1.8
LIG4-201ENST00000356922 FCRL1Q96LA6 429 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 KCNC2Q96PR1 638 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 MYCBPQ99417 103 aaPredicted RBP3.79□□□□□ -1.8
LIG4-201ENST00000356922 TRIM8Q9BZR9 551 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 TRIM4Q9C037 500 aa3.79□□□□□ -1.8
LIG4-201ENST00000356922 PITHD1Q9GZP4 211 aaPredicted RBP3.79□□□□□ -1.8
LIG4-201ENST00000356922 NMUR2Q9GZQ4 415 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms