RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 BORCS7Q96B45 105 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 PTCHD1Q96NR3 888 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 CDCA3Q99618 268 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-202ENST00000356435 TTYH2Q9BSA4 534 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 POLR2J2Q9GZM3 115 aaKnown RBP5.34□□□□□ -1.55
PTPRD-202ENST00000356435 CTPS2Q9NRF8 586 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 ZNF701Q9NV72 531 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-202ENST00000356435 HPF1Q9NWY4 346 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 PPM1HQ9ULR3 514 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 BCAS2O75934 225 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-202ENST00000356435 MT-ND2P03891 347 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 SPARCP09486 303 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 ZNF43P17038 809 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 FASLGP48023 281 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 NR0B1P51843 470 aaKnown RBP5.34□□□□□ -1.55
PTPRD-202ENST00000356435 PCBP2Q15366 365 aaKnown RBP eCLIP5.34□□□□□ -1.55
PTPRD-202ENST00000356435 ZNF805Q5CZA5 627 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 SHQ1Q6PI26 577 aaKnown RBP5.34□□□□□ -1.55
PTPRD-202ENST00000356435 TMIGD1Q6UXZ0 262 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 TRAM1L1Q8N609 369 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 ANKK1Q8NFD2 765 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 OR4K14Q8NGD5 310 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 OR13C4Q8NGS5 318 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 LRTOMTQ8WZ04 291 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 SH3YL1Q96HL8 342 aaPredicted RBP5.34□□□□□ -1.55
PTPRD-202ENST00000356435 TMEM209Q96SK2 561 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 CHIAQ9BZP6 476 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 DERL2Q9GZP9 239 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 FZD8Q9H461 694 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 MYNNQ9NPC7 610 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 GKN1Q9NS71 199 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 TMEM248Q9NWD8 314 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 GPRC5BQ9NZH0 403 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 ZNF451Q9Y4E5 1061 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 PIAS3Q9Y6X2 628 aa5.34□□□□□ -1.55
PTPRD-202ENST00000356435 GGT3PA6NGU5 568 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 NOBOXO60393 691 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 H2BFMP0C1H6 154 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 C8orf89P0DMQ9 161 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 IFI30P13284 250 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 MSX1P28360 303 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 GNRHRP30968 328 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 HSD17B7P56937 341 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 GSTM4Q03013 218 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 CTC1Q2NKJ3 1217 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 ARSHQ5FYA8 562 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 PLEKHS1Q5SXH7 462 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 GTF2IRD2BQ6EKJ0 949 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 RAB12Q6IQ22 244 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 KCTD18Q6PI47 426 aaPredicted RBP5.34□□□□□ -1.56
PTPRD-202ENST00000356435 AGTRAPQ6RW13 159 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 Q6ZNX1 250 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 GTF2IRD2Q86UP8 949 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 ZNF440Q8IYI8 595 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 ZNF610Q8N9Z0 462 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 STOML3Q8TAV4 291 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 ZC3H10Q96K80 434 aaKnown RBP5.34□□□□□ -1.56
PTPRD-202ENST00000356435 FAM84AQ96KN4 292 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 AP1S3Q96PC3 154 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 NUDT15Q9NV35 164 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 ABRACLQ9P1F3 81 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 DHDHQ9UQ10 334 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 FARSAQ9Y285 508 aaKnown RBP5.34□□□□□ -1.56
PTPRD-202ENST00000356435 COL22A1Q8NFW1 1626 aaPredicted RBP5.34□□□□□ -1.56
PTPRD-202ENST00000356435 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.34□□□□□ -1.56
PTPRD-202ENST00000356435 OR6C74A6NCV1 312 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 C9JVG2 144 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 PHYHO14832 338 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 SLC16A5O15375 505 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 IFNA7P01567 189 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 RNH1P13489 461 aaKnown RBP5.34□□□□□ -1.56
PTPRD-202ENST00000356435 RAC2P15153 192 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 DDCP20711 480 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 DNAJB1P25685 340 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 IDH3AP50213 366 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 ADAM15Q13444 863 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 TRAM1Q15629 374 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 VWA5B1Q5TIE3 1220 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 LRRN1Q6UXK5 716 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 TSGA13Q96PP4 275 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 RETREG1Q9H6L5 497 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 CD207Q9UJ71 328 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 KLHL21Q9UJP4 597 aa5.34□□□□□ -1.56
PTPRD-202ENST00000356435 E7ESA3 106 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 ACOX3O15254 700 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 NIPSNAP2O75323 286 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 TBX18O95935 607 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 IGHEP01854 428 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 CD63P08962 238 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 GSTT2P0CG29 244 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 C7P10643 843 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 JUNDP17535 347 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 PROZP22891 400 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 FMO3P31513 532 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 KCNC1P48547 511 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 POLR2HP52434 150 aaKnown RBP5.33□□□□□ -1.56
PTPRD-202ENST00000356435 HNRNPKP61978 463 aaKnown RBP eCLIP5.33□□□□□ -1.56
PTPRD-202ENST00000356435 ARG2P78540 354 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 TRAM2Q15035 370 aa5.33□□□□□ -1.56
PTPRD-202ENST00000356435 CEACAM20Q6UY09 585 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms