RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 GNAO1P09471 354 aa6.24□□□□□ -1.41
UPF2-201ENST00000356352 PGCP20142 388 aa6.24□□□□□ -1.41
UPF2-201ENST00000356352 GNRHRP30968 328 aa6.24□□□□□ -1.41
UPF2-201ENST00000356352 RGS19P49795 217 aa6.24□□□□□ -1.41
UPF2-201ENST00000356352 MLLT6P55198 1093 aaPredicted RBP6.24□□□□□ -1.41
UPF2-201ENST00000356352 RPS15AP62244 130 aaKnown RBP6.24□□□□□ -1.41
UPF2-201ENST00000356352 ZNF45Q02386 682 aa6.24□□□□□ -1.41
UPF2-201ENST00000356352 KLF1Q13351 362 aaPredicted RBP6.24□□□□□ -1.41
UPF2-201ENST00000356352 MELKQ14680 651 aa6.24□□□□□ -1.41
UPF2-201ENST00000356352 TMEM225Q6GV28 225 aa6.24□□□□□ -1.41
UPF2-201ENST00000356352 ZNF773Q6PK81 442 aa6.24□□□□□ -1.41
UPF2-201ENST00000356352 NANOS1Q8WY41 292 aaKnown RBP6.24□□□□□ -1.41
UPF2-201ENST00000356352 MCHR1Q99705 422 aa6.24□□□□□ -1.41
UPF2-201ENST00000356352 PCDHAC1Q9H158 963 aa6.24□□□□□ -1.41
UPF2-201ENST00000356352 XKR8Q9H6D3 395 aa6.24□□□□□ -1.41
UPF2-201ENST00000356352 C1orf226A1L170 272 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 GJE1A6NN92 205 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 GRXCR1A8MXD5 290 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 M0R2N6 131 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 TOR1BO14657 336 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 EMC8O43402 210 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 LATS1O95835 1130 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 C7P10643 843 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 CCNOP22674 350 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 FRKP42685 505 aaPredicted RBP6.23□□□□□ -1.41
UPF2-201ENST00000356352 CARTPTQ16568 116 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 PTCHD3Q3KNS1 767 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 ZNF404Q494X3 552 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 GPRC6AQ5T6X5 926 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 ERN2Q76MJ5 926 aaKnown RBP6.23□□□□□ -1.41
UPF2-201ENST00000356352 KCTD9Q7L273 389 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 TMED4Q7Z7H5 227 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 LHFPL3Q86UP9 236 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 RNF130Q86XS8 419 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 TICAM1Q8IUC6 712 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 SNX29P2Q8IUI4 249 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 SCLYQ96I15 445 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 WDR92Q96MX6 357 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 ZNF285Q96NJ3 590 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 ZNF382Q96SR6 550 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 EBF4Q9BQW3 602 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 SRRDQ9UH36 339 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 KCNS2Q9ULS6 477 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 RBMX2Q9Y388 322 aaKnown RBP6.23□□□□□ -1.41
UPF2-201ENST00000356352 MAB21L2Q9Y586 359 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 DUOX1Q9NRD9 1551 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 A0A096LPI6 279 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 TRIM64BA6NI03 449 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 H0YAE9 185 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 PRKYO43930 277 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 DLX3O60479 287 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 ZNF821O75541 412 aaPredicted RBP6.23□□□□□ -1.41
UPF2-201ENST00000356352 DIRAS3O95661 229 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 CCL5P13501 91 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 MAGEA8P43361 318 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 ENTPD1P49961 510 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 AFF1P51825 1210 aaKnown RBP6.23□□□□□ -1.41
UPF2-201ENST00000356352 TLE2Q04725 743 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 CCINQ13939 588 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 ZNF805Q5CZA5 627 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 FOXRED2Q8IWF2 684 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 DNAAF1Q8NEP3 725 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 OR2T33Q8NG76 320 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 OR6N2Q8NGY6 317 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 ZNF420Q8TAQ5 688 aaPredicted RBP6.23□□□□□ -1.41
UPF2-201ENST00000356352 CANT1Q8WVQ1 401 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 BIRC7Q96CA5 298 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 MROQ9BYG7 248 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 VNN3Q9NY84 501 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 OARD1Q9Y530 152 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.23□□□□□ -1.41
UPF2-201ENST00000356352 C9IYK1 514 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 VILLO15195 856 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 FAM189A1O60320 539 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 SLITRK5O94991 958 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 LPLP06858 475 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 CHRM5P08912 532 aaPredicted RBP6.23□□□□□ -1.41
UPF2-201ENST00000356352 SPARCP09486 303 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 CHRM1P11229 460 aaPredicted RBP6.23□□□□□ -1.41
UPF2-201ENST00000356352 GJA9P57773 515 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 UFM1P61960 85 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 PLCXD2Q0VAA5 305 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 NFE2L1Q14494 772 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 MOGQ16653 247 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 ANKDD1AQ495B1 522 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 HSD17B12Q53GQ0 312 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 ZNF678Q5SXM1 525 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 SLC39A4Q6P5W5 647 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 KLHDC10Q6PID8 442 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 RNF111Q6ZNA4 994 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 ZNF461Q8TAF7 563 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 HOXB13Q92826 284 aaPredicted RBP6.23□□□□□ -1.41
UPF2-201ENST00000356352 P2RY13Q9BPV8 354 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 IKZF4Q9H2S9 585 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 SFXN1Q9H9B4 322 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 GKN1Q9NS71 199 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 ZFP57Q9NU63 452 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 KCNK6Q9Y257 313 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 A6NCN8 305 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 GRXCR2A6NFK2 248 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms