RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 OR56A5P0C7T3 313 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 KIR2DL3P43628 341 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 CRISP1P54107 249 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 P2RX3P56373 397 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 SELENOWP63302 87 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 CLPPQ16740 277 aaPredicted RBP13.03□□□□□ -0.32
TRIM4-203ENST00000355947 ZSWIM7Q19AV6 140 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 RTP2Q5QGT7 225 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 CXorf57Q6NSI4 855 aaKnown RBP13.03□□□□□ -0.32
TRIM4-203ENST00000355947 IL20RBQ6UXL0 311 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 ZNF367Q7RTV3 350 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 CCDC28AQ8IWP9 274 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 NATD1Q8N6N6 113 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 SLC37A3Q8NCC5 494 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 FAM83DQ9H4H8 585 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 HHATLQ9HCP6 504 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 ALG5Q9Y673 324 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 SCN4AP35499 1836 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 RTCAO00442 366 aaKnown RBP13.03□□□□□ -0.32
TRIM4-203ENST00000355947 CSO75390 466 aaKnown RBP13.03□□□□□ -0.32
TRIM4-203ENST00000355947 PDE9AO76083 593 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 DDX5P17844 614 aaKnown RBP13.03□□□□□ -0.32
TRIM4-203ENST00000355947 ATF4P18848 351 aaPredicted RBP13.03□□□□□ -0.32
TRIM4-203ENST00000355947 MYL12AP19105 171 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 PRKACBP22694 351 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 AOAHP28039 575 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 CSTF2P33240 577 aaKnown RBP eCLIP13.03□□□□□ -0.32
TRIM4-203ENST00000355947 CSTF1Q05048 431 aaKnown RBP13.03□□□□□ -0.32
TRIM4-203ENST00000355947 P2RY14Q15391 338 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 DUSP7Q16829 419 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 GPRC6AQ5T6X5 926 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 NCEH1Q6PIU2 408 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 TAS1R1Q7RTX1 841 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 PDZD3Q86UT5 571 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 FLCNQ8NFG4 579 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 KLHL6Q8WZ60 621 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 KAT2AQ92830 837 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 TSPAN18Q96SJ8 248 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 PRR14Q9BWN1 585 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 SNX11Q9Y5W9 270 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 B4DXG7 233 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 RGS13O14921 159 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 HPGDSO60760 199 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 CR2P20023 1033 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 CCT3P49368 545 aaKnown RBP13.03□□□□□ -0.32
TRIM4-203ENST00000355947 XKP51811 444 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 MAPK12P53778 367 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 CSNK2BP67870 215 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 LSM11P83369 360 aaKnown RBP eCLIP13.03□□□□□ -0.32
TRIM4-203ENST00000355947 SLC5A12Q1EHB4 618 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 PXDC1Q5TGL8 231 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 LCN1P1Q5VSP4 162 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 USP45Q70EL2 814 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 GRPEL2Q8TAA5 225 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 FBLIM1Q8WUP2 373 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 TADA1Q96BN2 335 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 PPCDCQ96CD2 204 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 PPIL3Q9H2H8 161 aaKnown RBP13.03□□□□□ -0.32
TRIM4-203ENST00000355947 FNIP2Q9P278 1114 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 NDRG2Q9UN36 371 aaKnown RBP13.03□□□□□ -0.32
TRIM4-203ENST00000355947 SATB2Q9UPW6 733 aa13.03□□□□□ -0.32
TRIM4-203ENST00000355947 A0A0X1KG70 313 aa13.02□□□□□ -0.32
TRIM4-203ENST00000355947 NME6O75414 186 aaPredicted RBP13.02□□□□□ -0.32
TRIM4-203ENST00000355947 STC2O76061 302 aa13.02□□□□□ -0.32
TRIM4-203ENST00000355947 KLK1P06870 262 aa13.02□□□□□ -0.32
TRIM4-203ENST00000355947 ASGR1P07306 291 aa13.02□□□□□ -0.32
TRIM4-203ENST00000355947 CSF3P09919 207 aa13.02□□□□□ -0.32
TRIM4-203ENST00000355947 GJA1P17302 382 aa13.02□□□□□ -0.32
TRIM4-203ENST00000355947 GPX2P18283 190 aa13.02□□□□□ -0.32
TRIM4-203ENST00000355947 ENDOUP21128 410 aaKnown RBP13.02□□□□□ -0.32
TRIM4-203ENST00000355947 SSTR2P30874 369 aa13.02□□□□□ -0.32
TRIM4-203ENST00000355947 OR3A3P47888 321 aa13.02□□□□□ -0.32
TRIM4-203ENST00000355947 CRYBA2P53672 197 aa13.02□□□□□ -0.32
TRIM4-203ENST00000355947 MAP4K2Q12851 820 aa13.02□□□□□ -0.32
TRIM4-203ENST00000355947 LARS2Q15031 903 aaKnown RBP13.02□□□□□ -0.32
TRIM4-203ENST00000355947 ZNF385BQ569K4 471 aa13.02□□□□□ -0.32
TRIM4-203ENST00000355947 FRMPD2BQ6IN97 320 aa13.02□□□□□ -0.32
TRIM4-203ENST00000355947 ZNF366Q8N895 744 aa13.02□□□□□ -0.32
TRIM4-203ENST00000355947 MRPS31Q92665 395 aaKnown RBP13.02□□□□□ -0.32
TRIM4-203ENST00000355947 MSANTD3Q96H12 275 aa13.02□□□□□ -0.32
TRIM4-203ENST00000355947 CRELD1Q96HD1 420 aa13.02□□□□□ -0.32
TRIM4-203ENST00000355947 CCDC32Q9BV29 185 aa13.02□□□□□ -0.32
TRIM4-203ENST00000355947 KLHL1Q9NR64 748 aa13.02□□□□□ -0.32
TRIM4-203ENST00000355947 SEMA3GQ9NS98 782 aa13.02□□□□□ -0.32
TRIM4-203ENST00000355947 ZNF224Q9NZL3 707 aa13.02□□□□□ -0.32
TRIM4-203ENST00000355947 TRPM5Q9NZQ8 1165 aa13.02□□□□□ -0.32
TRIM4-203ENST00000355947 TMEM202A6NGA9 273 aa13.02□□□□□ -0.33
TRIM4-203ENST00000355947 CKMP06732 381 aa13.02□□□□□ -0.33
TRIM4-203ENST00000355947 WNT3P56703 355 aa13.02□□□□□ -0.33
TRIM4-203ENST00000355947 TAS2R50P59544 299 aa13.02□□□□□ -0.33
TRIM4-203ENST00000355947 PIN1Q13526 163 aaPredicted RBP13.02□□□□□ -0.33
TRIM4-203ENST00000355947 EFR3AQ14156 821 aa13.02□□□□□ -0.33
TRIM4-203ENST00000355947 CLLU1OSQ5K130 101 aa13.02□□□□□ -0.33
TRIM4-203ENST00000355947 C9orf131Q5VYM1 1079 aa13.02□□□□□ -0.33
TRIM4-203ENST00000355947 SPRYD7Q5W111 196 aa13.02□□□□□ -0.33
TRIM4-203ENST00000355947 LAPTM4BQ86VI4 370 aa13.02□□□□□ -0.33
TRIM4-203ENST00000355947 THOC6Q86W42 341 aaKnown RBP13.02□□□□□ -0.33
TRIM4-203ENST00000355947 TMEM173Q86WV6 379 aaPredicted RBP13.02□□□□□ -0.33
TRIM4-203ENST00000355947 FAM9CQ8IZT9 166 aa13.02□□□□□ -0.33
TRIM4-203ENST00000355947 VWA5B2Q8N398 1253 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms