RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 H0YIG0 161 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 KLRC4-KLRK1H3BQV0 150 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 HAT1O14929 419 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 PEX1O43933 1283 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 CCNDBP1O95273 360 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 GAS8O95995 478 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 ENDOUP21128 410 aaKnown RBP10.48□□□□□ -0.73
RTN3-204ENST00000354497 PCSK6P29122 969 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 KIR2DL3P43628 341 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 DLX5P56178 289 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 SLC26A5P58743 744 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 PRAMEP78395 509 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 KEAP1Q14145 624 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 FAM53BQ14153 422 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 NSDHLQ15738 373 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 ASTE1Q2TB18 679 aaPredicted RBP10.48□□□□□ -0.73
RTN3-204ENST00000354497 ZNF585AQ6P3V2 769 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 ARHGAP11AQ6P4F7 1023 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 OTOAQ7RTW8 1153 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 WDR53Q7Z5U6 358 aaPredicted RBP10.48□□□□□ -0.73
RTN3-204ENST00000354497 SLC7A5P1Q8MH63 180 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 CYP4X1Q8N118 509 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 LGI4Q8N135 537 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 MYO1HQ8N1T3 1032 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 PPFIBP2Q8ND30 876 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 OR52N2Q8NGI0 321 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 OR4L1Q8NH43 312 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 SMPDL3AQ92484 453 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 TSLPQ969D9 159 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 DGCR14Q96DF8 476 aaKnown RBP10.48□□□□□ -0.73
RTN3-204ENST00000354497 PANX3Q96QZ0 392 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 MACROD1Q9BQ69 325 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 DPH5Q9H2P9 285 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 RASSF1Q9NS23 344 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 RHBDL2Q9NX52 303 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 DMGDHQ9UI17 866 aaKnown RBP10.48□□□□□ -0.73
RTN3-204ENST00000354497 FBXO9Q9UK97 447 aaPredicted RBP10.48□□□□□ -0.73
RTN3-204ENST00000354497 PRELID1Q9Y255 219 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 CAPN6Q9Y6Q1 641 aa10.48□□□□□ -0.73
RTN3-204ENST00000354497 ACANP16112 2415 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 IGKV1-8A0A0C4DH67 115 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 FAM25EA8MYX2 175 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 CES2O00748 559 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 FCHO1O14526 889 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 SNX3O60493 162 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 RDH16O75452 317 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 NSA2O95478 260 aaKnown RBP10.47□□□□□ -0.73
RTN3-204ENST00000354497 METTL18O95568 372 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 CYC1P08574 325 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 KRT16P08779 473 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 UQCRC1P31930 480 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 ZFP36L2P47974 494 aaKnown RBP10.47□□□□□ -0.73
RTN3-204ENST00000354497 HLCSP50747 726 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 KCNJ2P63252 427 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 PLGLB1Q02325 96 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 DEFB113Q30KQ7 82 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 KCTD11Q693B1 232 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 PAMR1Q6UXH9 720 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 CAMKMTQ7Z624 323 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 ARHGEF39Q8N4T4 335 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 OR52K1Q8NGK4 314 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 OR13J1Q8NGT2 312 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 KRT35Q92764 455 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 PEX11GQ96HA9 241 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 CCDC42Q96M95 316 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 SIKE1Q9BRV8 207 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 ATG10Q9H0Y0 220 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 ANKHQ9HCJ1 492 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 DMRT3Q9NQL9 472 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 PNPLA3Q9NST1 481 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 CRIM1Q9NZV1 1036 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 C6orf203Q9P0P8 240 aaPredicted RBP10.47□□□□□ -0.73
RTN3-204ENST00000354497 CHMP2BQ9UQN3 213 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 GPC6Q9Y625 555 aaPredicted RBP10.47□□□□□ -0.73
RTN3-204ENST00000354497 DUSP10Q9Y6W6 482 aa10.47□□□□□ -0.73
RTN3-204ENST00000354497 FAM166BA8MTA8 275 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 ARHGEF33A8MVX0 844 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 PRMT5O14744 637 aaPredicted RBP10.46□□□□□ -0.74
RTN3-204ENST00000354497 RAF1P04049 648 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 HEXAP06865 529 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 BCL6P41182 706 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 PAFAH1B1P43034 410 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 RASSF2P50749 326 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 NR0B1P51843 470 aaKnown RBP10.46□□□□□ -0.74
RTN3-204ENST00000354497 FXNQ16595 210 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 P3H1Q32P28 736 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 GXYLT1Q4G148 440 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 ANKRD20A4Q4UJ75 823 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 HSP90AA5PQ58FG0 334 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 EMC4Q5J8M3 183 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 AARS2Q5JTZ9 985 aaKnown RBP10.46□□□□□ -0.74
RTN3-204ENST00000354497 TSTD2Q5T7W7 516 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 MEI1Q5TIA1 1274 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 DHRS4L2Q6PKH6 230 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 PAOXQ6QHF9 649 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 PPP1R21Q6ZMI0 780 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 ZNF534Q76KX8 674 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 CXXC5Q7LFL8 322 aaKnown RBP10.46□□□□□ -0.74
RTN3-204ENST00000354497 ZNF227Q86WZ6 799 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 ST13P4Q8IZP2 240 aaPredicted RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms