RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 DIRAS1O95057 198 aa15.9■□□□□ 0.14
SAMM50-201ENST00000350028 DRD2P14416 443 aa15.9■□□□□ 0.14
SAMM50-201ENST00000350028 NDUFS1P28331 727 aa15.9■□□□□ 0.14
SAMM50-201ENST00000350028 LTBRP36941 435 aa15.9■□□□□ 0.14
SAMM50-201ENST00000350028 FRKP42685 505 aaPredicted RBP15.9■□□□□ 0.14
SAMM50-201ENST00000350028 ALDH9A1P49189 494 aa15.9■□□□□ 0.14
SAMM50-201ENST00000350028 MANFP55145 182 aaKnown RBP15.9■□□□□ 0.14
SAMM50-201ENST00000350028 BROXQ5VW32 411 aa15.9■□□□□ 0.14
SAMM50-201ENST00000350028 WASH2PQ6VEQ5 465 aa15.9■□□□□ 0.14
SAMM50-201ENST00000350028 FAM124AQ86V42 546 aa15.9■□□□□ 0.14
SAMM50-201ENST00000350028 ZC3H7AQ8IWR0 971 aaKnown RBP15.9■□□□□ 0.14
SAMM50-201ENST00000350028 SETD9Q8NE22 299 aa15.9■□□□□ 0.14
SAMM50-201ENST00000350028 CHDHQ8NE62 594 aaPredicted RBP15.9■□□□□ 0.14
SAMM50-201ENST00000350028 OR5AK3PQ8NH89 298 aa15.9■□□□□ 0.14
SAMM50-201ENST00000350028 MPP4Q96JB8 637 aa15.9■□□□□ 0.14
SAMM50-201ENST00000350028 ZNF347Q96SE7 839 aa15.9■□□□□ 0.14
SAMM50-201ENST00000350028 BARD1Q99728 777 aaKnown RBP15.9■□□□□ 0.14
SAMM50-201ENST00000350028 RUBCNLQ9H714 662 aa15.9■□□□□ 0.14
SAMM50-201ENST00000350028 NEUROD4Q9HD90 331 aa15.9■□□□□ 0.14
SAMM50-201ENST00000350028 BLOC1S6Q9UL45 172 aa15.9■□□□□ 0.14
SAMM50-201ENST00000350028 PIAS3Q9Y6X2 628 aa15.9■□□□□ 0.14
SAMM50-201ENST00000350028 M0QX08 132 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 ZNF701M0R085 212 aaPredicted RBP15.89■□□□□ 0.13
SAMM50-201ENST00000350028 BCKDKO14874 412 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 TMPRSS11DO60235 418 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 JRKO75564 520 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 APBB3O95704 486 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 JUNBP17275 347 aaPredicted RBP15.89■□□□□ 0.13
SAMM50-201ENST00000350028 CRHBPP24387 322 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 EEF1B2P24534 225 aaKnown RBP15.89■□□□□ 0.13
SAMM50-201ENST00000350028 CMPK1P30085 196 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 YAP1P46937 504 aaKnown RBP15.89■□□□□ 0.13
SAMM50-201ENST00000350028 ARFIP1P53367 373 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 CASP9P55211 416 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 PCBP4P57723 403 aaKnown RBP15.89■□□□□ 0.13
SAMM50-201ENST00000350028 GABARAPL2P60520 117 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 DSTNP60981 165 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 ISL1P61371 349 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 CD47Q08722 323 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 NFATC4Q14934 902 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 SKIV2LQ15477 1246 aaKnown RBP15.89■□□□□ 0.13
SAMM50-201ENST00000350028 SAXO2Q658L1 398 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 ENPP7Q6UWV6 458 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 KCTD8Q6ZWB6 473 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 TRIM69Q86WT6 500 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 PLD3Q8IV08 490 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 SPPL2AQ8TCT8 520 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 NEURL3Q96EH8 262 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 MRGPRX1Q96LB2 322 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 WDR92Q96MX6 357 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 TUBA1CQ9BQE3 449 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 SARGQ9BW04 601 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 ADNPQ9H2P0 1102 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 POLR1BQ9H9Y6 1135 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 ACSS1Q9NUB1 689 aaPredicted RBP15.89■□□□□ 0.13
SAMM50-201ENST00000350028 THUMPD1Q9NXG2 353 aaKnown RBP15.89■□□□□ 0.13
SAMM50-201ENST00000350028 TAS2R7Q9NYW3 318 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 HSPE1-MOB4S4R3N1 261 aa15.89■□□□□ 0.13
SAMM50-201ENST00000350028 A0A0A6YYD5 115 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 LRIT2A6NDA9 550 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 POM121BA6NF01 834 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 MITFO75030 526 aaPredicted RBP15.88■□□□□ 0.13
SAMM50-201ENST00000350028 SERPIND1P05546 499 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 ITGA2P17301 1181 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 AHRP35869 848 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 SSR2P43308 183 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 PCBP3P57721 371 aaKnown RBP15.88■□□□□ 0.13
SAMM50-201ENST00000350028 DYNC1I2Q13409 638 aaKnown RBP15.88■□□□□ 0.13
SAMM50-201ENST00000350028 KEAP1Q14145 624 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 MLC1Q15049 377 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 EOGTQ5NDL2 527 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 KIAA1324Q6UXG2 1013 aaKnown RBP15.88■□□□□ 0.13
SAMM50-201ENST00000350028 OR2L3Q8NG85 312 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 FBLIM1Q8WUP2 373 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 OR1E3Q8WZA6 343 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 TAMM41Q96BW9 452 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 ZBED6CLQ96FA7 236 aaPredicted RBP15.88■□□□□ 0.13
SAMM50-201ENST00000350028 FAIM2Q9BWQ8 316 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 SLC6A20Q9NP91 592 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 THSD1Q9NS62 852 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 SCHIP1Q9P0W5 487 aaPredicted RBP15.88■□□□□ 0.13
SAMM50-201ENST00000350028 SNX7Q9UNH6 387 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 SNX8Q9Y5X2 465 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 COL4A2P08572 1712 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 HEATR5BQ9P2D3 2071 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 ADAMDEC1O15204 470 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 ABCB7O75027 752 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 HTR1BP28222 390 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 BCL6P41182 706 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 CLDN2P57739 230 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 LRRC32Q14392 662 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 MEP1AQ16819 746 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 ADPRMQ3LIE5 342 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 FAHD1Q6P587 224 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 GALNT5Q7Z7M9 940 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 ARMC8Q8IUR7 673 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 PDXPQ96GD0 296 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 CNDP2Q96KP4 475 aaKnown RBP15.88■□□□□ 0.13
SAMM50-201ENST00000350028 RIBC2Q9H4K1 309 aa15.88■□□□□ 0.13
SAMM50-201ENST00000350028 LTB4R2Q9NPC1 389 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms