RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 RSL1D1O76021 490 aaKnown RBP10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 RAP2AP10114 183 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 ECHS1P30084 290 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 LEPRP48357 1165 aaKnown RBP10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 VAMP2P63027 116 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 TSTQ16762 297 aaKnown RBP10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 NCBP2-AS2Q69YL0 99 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 GRASPQ7Z6J2 395 aaPredicted RBP10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 OAFQ86UD1 273 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 RETREG3Q86VR2 466 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 FAM46DQ8NEK8 389 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 OR5T1Q8NG75 326 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 OR1M1Q8NGA1 313 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 SUSD3Q96L08 255 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 YIPF4Q9BSR8 244 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 GATA5Q9BWX5 397 aaPredicted RBP10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 TMEM185BQ9H7F4 350 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 ZNF358Q9NW07 568 aa10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 HEMK1Q9Y5R4 338 aaPredicted RBP10.71□□□□□ -0.69
SMARCE1-202ENST00000348513 NFAT5O94916 1531 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 A0A1W2PQ45 241 aaPredicted RBP10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 A0A1W2PQY0 241 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 CYTIPO60759 359 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 CBR1P16152 277 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 IL12BP29460 328 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 C1QTNF8P60827 252 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 CHRNEQ04844 493 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 TARDBPQ13148 414 aaKnown RBP eCLIP10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 NFATC2Q13469 925 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 PCBP2Q15366 365 aaKnown RBP eCLIP10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 TEAD2Q15562 447 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 MEP1AQ16819 746 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 CNKSR3Q6P9H4 555 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 SMARCD3Q6STE5 483 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 C2CD4CQ8TF44 421 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 CPNE2Q96FN4 548 aaPredicted RBP10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 FUBP3Q96I24 572 aaKnown RBP eCLIP10.71□□□□□ -0.76e-7■□□□□ 8.2
SMARCE1-202ENST00000348513 SUV39H2Q9H5I1 410 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 C11orf16Q9NQ32 467 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 GABRQQ9UN88 632 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 HIF3AQ9Y2N7 669 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 INSL6Q9Y581 213 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 PEAK1Q9H792 1746 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 PLIN3O60664 434 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 ZNF780AO75290 641 aaPredicted RBP10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 TMEM63AO94886 807 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 ESR1P03372 595 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 RD3LP0DJH9 198 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 DPYSL2Q16555 572 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 CRTC2Q53ET0 693 aaPredicted RBP10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 TPGS2Q68CL5 300 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 SLC8B1Q6J4K2 584 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 OSBPL2Q9H1P3 480 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 GAREM1Q9H706 876 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 PTTG3PQ9NZH4 202 aa10.71□□□□□ -0.7
SMARCE1-202ENST00000348513 NEMP2A6NFY4 417 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 RASAL1O95294 804 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 PIGRP01833 764 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 C8GP07360 202 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 CPN2P22792 545 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 GMPRP36959 345 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 CCR10P46092 362 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 SLC11A1P49279 550 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 PPP3R1P63098 170 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 VLDLRP98155 873 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 XKR4Q5GH76 650 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 SIRPB2Q5JXA9 342 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 ADNP2Q6IQ32 1131 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 LYSMD3Q7Z3D4 306 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 OSTM1Q86WC4 334 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 ZFP82Q8N141 532 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 ZNF433Q8N7K0 673 aaPredicted RBP10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 KDM1BQ8NB78 822 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 ZNF548Q8NEK5 533 aaPredicted RBP10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 SLC41A3Q96GZ6 507 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 WDR26Q9H7D7 661 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 PRDM8Q9NQV8 689 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 LOC100509620A0A075B734 347 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 WNT9AO14904 365 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 CSF2RAP15509 400 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 KCNC1P48547 511 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 CDH12P55289 794 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 AIMP2Q13155 320 aaKnown RBP10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 ADGRF1Q5T601 910 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 PRSS42Q7Z5A4 293 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 COMTD1Q86VU5 262 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 CMTM8Q8IZV2 173 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 TMEM185AQ8NFB2 350 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 OR6Q1Q8NGQ2 317 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 SLC13A3Q8WWT9 602 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 GPER1Q99527 375 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 TRMT61BQ9BVS5 477 aaKnown RBP10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 CCDC86Q9H6F5 360 aaKnown RBP10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 GPN2Q9H9Y4 310 aaPredicted RBP10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 DUSP22Q9NRW4 184 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 COPS3Q9UNS2 423 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 NME7Q9Y5B8 376 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 HS3ST4Q9Y661 456 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 OR7A17O14581 309 aa10.7□□□□□ -0.7
SMARCE1-202ENST00000348513 B3GALT2O43825 422 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms