RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 SLC9B1P1A6NJY1 282 aa17.72■□□□□ 0.43
PTN-201ENST00000348225 H3BNX3 289 aa17.72■□□□□ 0.43
PTN-201ENST00000348225 PRAMEF10O60809 474 aa17.72■□□□□ 0.43
PTN-201ENST00000348225 EIF2S1P05198 315 aaKnown RBP17.72■□□□□ 0.43
PTN-201ENST00000348225 ABCB1P08183 1280 aaPredicted RBP17.72■□□□□ 0.43
PTN-201ENST00000348225 SMIM10L1P0DMW3 83 aa17.72■□□□□ 0.43
PTN-201ENST00000348225 ENGP17813 658 aa17.72■□□□□ 0.43
PTN-201ENST00000348225 GPR3P46089 330 aa17.72■□□□□ 0.43
PTN-201ENST00000348225 SERPINA11Q86U17 422 aa17.72■□□□□ 0.43
PTN-201ENST00000348225 CALHM3Q86XJ0 350 aa17.72■□□□□ 0.43
PTN-201ENST00000348225 SPPL2CQ8IUH8 684 aa17.72■□□□□ 0.43
PTN-201ENST00000348225 OR4N4Q8N0Y3 316 aa17.72■□□□□ 0.43
PTN-201ENST00000348225 ZCCHC10Q8TBK6 192 aa17.72■□□□□ 0.43
PTN-201ENST00000348225 OR5P2Q8WZ92 322 aa17.72■□□□□ 0.43
PTN-201ENST00000348225 DUS3LQ96G46 650 aaKnown RBP17.72■□□□□ 0.43
PTN-201ENST00000348225 SMIM10Q96HG1 83 aa17.72■□□□□ 0.43
PTN-201ENST00000348225 EFHD1Q9BUP0 239 aa17.72■□□□□ 0.43
PTN-201ENST00000348225 TPT1P8Q9HAU6 139 aa17.72■□□□□ 0.43
PTN-201ENST00000348225 TAS2R9Q9NYW1 312 aa17.72■□□□□ 0.43
PTN-201ENST00000348225 TAS2R7Q9NYW3 318 aa17.72■□□□□ 0.43
PTN-201ENST00000348225 GOLGA4Q13439 2230 aaKnown RBP17.71■□□□□ 0.43
PTN-201ENST00000348225 CACNA1EQ15878 2313 aa17.71■□□□□ 0.43
PTN-201ENST00000348225 TXNDC9O14530 226 aa17.71■□□□□ 0.43
PTN-201ENST00000348225 CFIP05156 583 aa17.71■□□□□ 0.43
PTN-201ENST00000348225 GIMD1P0DJR0 217 aa17.71■□□□□ 0.43
PTN-201ENST00000348225 GGT1P19440 569 aa17.71■□□□□ 0.43
PTN-201ENST00000348225 ALDH4A1P30038 563 aa17.71■□□□□ 0.43
PTN-201ENST00000348225 GCKP35557 465 aa17.71■□□□□ 0.43
PTN-201ENST00000348225 PTDSS1P48651 473 aaKnown RBP17.71■□□□□ 0.43
PTN-201ENST00000348225 HBA1P69905 142 aa17.71■□□□□ 0.43
PTN-201ENST00000348225 MTX3Q5HYI7 312 aa17.71■□□□□ 0.43
PTN-201ENST00000348225 GLYATQ6IB77 296 aa17.71■□□□□ 0.43
PTN-201ENST00000348225 ZCCHC8Q6NZY4 707 aaKnown RBP17.71■□□□□ 0.43
PTN-201ENST00000348225 FAM92BQ6ZTR7 304 aa17.71■□□□□ 0.43
PTN-201ENST00000348225 MICU2Q8IYU8 434 aa17.71■□□□□ 0.43
PTN-201ENST00000348225 EXOSC8Q96B26 276 aaKnown RBP17.71■□□□□ 0.43
PTN-201ENST00000348225 ZBED6CLQ96FA7 236 aaPredicted RBP17.71■□□□□ 0.43
PTN-201ENST00000348225 REXO5Q96IC2 774 aaKnown RBP17.71■□□□□ 0.43
PTN-201ENST00000348225 NSMCE2Q96MF7 247 aa17.71■□□□□ 0.43
PTN-201ENST00000348225 TGM7Q96PF1 710 aa17.71■□□□□ 0.43
PTN-201ENST00000348225 MAP3K3Q99759 626 aa17.71■□□□□ 0.43
PTN-201ENST00000348225 SPATA9Q9BWV2 254 aa17.71■□□□□ 0.43
PTN-201ENST00000348225 NEUROD4Q9HD90 331 aa17.71■□□□□ 0.43
PTN-201ENST00000348225 C6orf203Q9P0P8 240 aaPredicted RBP17.71■□□□□ 0.43
PTN-201ENST00000348225 PHF11Q9UIL8 331 aa17.71■□□□□ 0.43
PTN-201ENST00000348225 FBXW2Q9UKT8 454 aa17.71■□□□□ 0.43
PTN-201ENST00000348225 USP22Q9UPT9 525 aa17.71■□□□□ 0.43
PTN-201ENST00000348225 DUX1O43812 170 aa17.7■□□□□ 0.42
PTN-201ENST00000348225 B3GALT2O43825 422 aa17.7■□□□□ 0.42
PTN-201ENST00000348225 NCK1P16333 377 aa17.7■□□□□ 0.42
PTN-201ENST00000348225 ALOX12P18054 663 aa17.7■□□□□ 0.42
PTN-201ENST00000348225 GPX2P18283 190 aa17.7■□□□□ 0.42
PTN-201ENST00000348225 PSMA4P25789 261 aaKnown RBP17.7■□□□□ 0.42
PTN-201ENST00000348225 SLC7A1P30825 629 aa17.7■□□□□ 0.42
PTN-201ENST00000348225 VSX2P58304 361 aaPredicted RBP17.7■□□□□ 0.42
PTN-201ENST00000348225 GPLD1P80108 840 aa17.7■□□□□ 0.42
PTN-201ENST00000348225 GAB1Q13480 694 aa17.7■□□□□ 0.42
PTN-201ENST00000348225 CYP51A1Q16850 503 aa17.7■□□□□ 0.42
PTN-201ENST00000348225 PRSS53Q2L4Q9 553 aa17.7■□□□□ 0.42
PTN-201ENST00000348225 HLA-BQ31612 363 aa17.7■□□□□ 0.42
PTN-201ENST00000348225 IRAK1BP1Q5VVH5 260 aa17.7■□□□□ 0.42
PTN-201ENST00000348225 LRRC74BQ6ZQY2 392 aa17.7■□□□□ 0.42
PTN-201ENST00000348225 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.7■□□□□ 0.42
PTN-201ENST00000348225 CARFQ8N187 725 aa17.7■□□□□ 0.42
PTN-201ENST00000348225 ZFP90Q8TF47 636 aa17.7■□□□□ 0.42
PTN-201ENST00000348225 NCSTNQ92542 709 aa17.7■□□□□ 0.42
PTN-201ENST00000348225 ZMYND15Q9H091 742 aa17.7■□□□□ 0.42
PTN-201ENST00000348225 ACSS1Q9NUB1 689 aaPredicted RBP17.7■□□□□ 0.42
PTN-201ENST00000348225 UTS2RQ9UKP6 389 aa17.7■□□□□ 0.42
PTN-201ENST00000348225 ERVK-11Q9UQG0 969 aa17.7■□□□□ 0.42
PTN-201ENST00000348225 ATG4BQ9Y4P1 393 aa17.7■□□□□ 0.42
PTN-201ENST00000348225 DHRS12A0PJE2 317 aa17.69■□□□□ 0.42
PTN-201ENST00000348225 SRPX2O60687 465 aaPredicted RBP17.69■□□□□ 0.42
PTN-201ENST00000348225 GPIP06744 558 aa17.69■□□□□ 0.42
PTN-201ENST00000348225 NTSP30990 170 aa17.69■□□□□ 0.42
PTN-201ENST00000348225 SOX11P35716 441 aa17.69■□□□□ 0.42
PTN-201ENST00000348225 VHLP40337 213 aa17.69■□□□□ 0.42
PTN-201ENST00000348225 FRKP42685 505 aaPredicted RBP17.69■□□□□ 0.42
PTN-201ENST00000348225 GZMMP51124 257 aa17.69■□□□□ 0.42
PTN-201ENST00000348225 MANFP55145 182 aaKnown RBP17.69■□□□□ 0.42
PTN-201ENST00000348225 POLE2P56282 527 aa17.69■□□□□ 0.42
PTN-201ENST00000348225 NR1D2Q14995 579 aa17.69■□□□□ 0.42
PTN-201ENST00000348225 TMEM214Q6NUQ4 689 aaKnown RBP17.69■□□□□ 0.42
PTN-201ENST00000348225 ERICH5Q6P6B1 374 aa17.69■□□□□ 0.42
PTN-201ENST00000348225 KANSL1Q7Z3B3 1105 aa17.69■□□□□ 0.42
PTN-201ENST00000348225 MCATQ8IVS2 390 aaKnown RBP17.69■□□□□ 0.42
PTN-201ENST00000348225 PQLC1Q8N2U9 271 aa17.69■□□□□ 0.42
PTN-201ENST00000348225 DTWD1Q8N5C7 304 aa17.69■□□□□ 0.42
PTN-201ENST00000348225 OR6C4Q8NGE1 309 aa17.69■□□□□ 0.42
PTN-201ENST00000348225 SLC35A5Q9BS91 424 aa17.69■□□□□ 0.42
PTN-201ENST00000348225 CHRNA10Q9GZZ6 450 aa17.69■□□□□ 0.42
PTN-201ENST00000348225 RAD21L1Q9H4I0 556 aa17.69■□□□□ 0.42
PTN-201ENST00000348225 FAM60AQ9NP50 221 aa17.69■□□□□ 0.42
PTN-201ENST00000348225 DNAAF2Q9NVR5 837 aaKnown RBP17.69■□□□□ 0.42
PTN-201ENST00000348225 AP4S1Q9Y587 144 aa17.69■□□□□ 0.42
PTN-201ENST00000348225 SDK1Q7Z5N4 2213 aa17.69■□□□□ 0.42
PTN-201ENST00000348225 IGHV1OR21-1A0A087WYE8 117 aa17.69■□□□□ 0.42
PTN-201ENST00000348225 A0A1W2PR48 441 aa17.69■□□□□ 0.42
PTN-201ENST00000348225 PROM1O43490 865 aa17.69■□□□□ 0.42
PTN-201ENST00000348225 SH3BP5O60239 455 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms