RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 SLC51AQ86UW1 340 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 TSPYL5Q86VY4 417 aaPredicted RBP18.7■□□□□ 0.58
HDAC4-201ENST00000345617 OR8S1Q8NH09 359 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 NSMAFQ92636 917 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 TRIB3Q96RU7 358 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 TPT1P8Q9HAU6 139 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 BRWD1Q9NSI6 2320 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 LATO43561 262 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 RNASEH2AO75792 299 aaKnown RBP18.7■□□□□ 0.58
HDAC4-201ENST00000345617 IRF2BP1Q8IU81 584 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 NELL2Q99435 816 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 DTLQ9NZJ0 730 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 IQCF5A8MTL0 148 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 ZNF487B1APH4 448 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 UGT3A2Q3SY77 523 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 AARDQ4LEZ3 155 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 ARHGAP11AQ6P4F7 1023 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 CILP2Q8IUL8 1156 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 STK35Q8TDR2 534 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 SIRPGQ9P1W8 387 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 MT-CYBP00156 380 aaPredicted RBP18.69■□□□□ 0.58
HDAC4-201ENST00000345617 PITPNBP48739 271 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 TIGARQ9NQ88 270 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 SCN11AQ9UI33 1791 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 KLHL21Q9UJP4 597 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 LIPT1Q9Y234 373 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 NUBP2Q9Y5Y2 271 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 HMX3A6NHT5 357 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 SLC22A31A6NKX4 558 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 EBLN1P0CF75 366 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 TPT1P13693 172 aaKnown RBP18.69■□□□□ 0.58
HDAC4-201ENST00000345617 ART1P52961 327 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 MLLT1Q03111 559 aaPredicted RBP18.69■□□□□ 0.58
HDAC4-201ENST00000345617 LSAMPQ13449 338 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 SSX2Q16385 188 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 MEP1AQ16819 746 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 C14orf28Q4W4Y0 310 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 BBS10Q8TAM1 723 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 THEM6Q8WUY1 208 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 SLC6A7Q99884 636 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 NIFKQ9BYG3 293 aaKnown RBP18.69■□□□□ 0.58
HDAC4-201ENST00000345617 ATG5Q9H1Y0 275 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 ASB6Q9NWX5 421 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 GRIK2Q13002 908 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 OR8J1Q8NGP2 316 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 SLC38A3Q99624 504 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 DNAJC27Q9NZQ0 273 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 KNDC1Q76NI1 1749 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 IL32P24001 234 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 DEFA6Q01524 100 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 SNTB2Q13425 540 aaKnown RBP18.69■□□□□ 0.58
HDAC4-201ENST00000345617 SYT3Q9BQG1 590 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 HIF3AQ9Y2N7 669 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 SLC34A2O95436 690 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 CSF2P04141 144 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 CSF1P09603 554 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 UNGP13051 313 aaPredicted RBP18.69■□□□□ 0.58
HDAC4-201ENST00000345617 IRF5Q13568 498 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 GPR68Q15743 365 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 SLC41A3Q96GZ6 507 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 HBEGFQ99075 208 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 SLBPQ14493 270 aaKnown RBP eCLIP18.69■□□□□ 0.58
HDAC4-201ENST00000345617 CDNFQ49AH0 187 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 LDB1Q86U70 411 aaPredicted RBP18.69■□□□□ 0.58
HDAC4-201ENST00000345617 OR1J4Q8NGS1 313 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 OR6K2Q8NGY2 324 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 KIF25Q9UIL4 384 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 SLC7A11Q9UPY5 501 aa18.69■□□□□ 0.58
HDAC4-201ENST00000345617 FXYD6P3P58550 94 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 C15orf52Q6ZUT6 534 aaKnown RBP18.68■□□□□ 0.58
HDAC4-201ENST00000345617 UPK1BO75841 260 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 TARBP2Q15633 366 aaKnown RBP18.68■□□□□ 0.58
HDAC4-201ENST00000345617 ANKRD54Q6NXT1 300 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 NUS1Q96E22 293 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 ADAM7Q9H2U9 754 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 NPAP1Q9NZP6 1156 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 WNT10BO00744 389 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 KIAA0513O60268 411 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 PCLAFQ15004 111 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 SFT2D3Q587I9 215 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 DNAJC22Q8N4W6 341 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 OR56A3Q8NH54 315 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 CENPOQ9BU64 300 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 KLHL13Q9P2N7 655 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 MRPL42Q9Y6G3 142 aaKnown RBP18.68■□□□□ 0.58
HDAC4-201ENST00000345617 IRF6O14896 467 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 TFP02787 698 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 ZNF35P13682 527 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 ADCYAP1R1P41586 468 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 NUDT6P53370 316 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 FAM69AQ5T7M9 428 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 FIBCD1Q8N539 461 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 GALNT11Q8NCW6 608 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 C7orf34Q96L11 122 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 B3GNT5Q9BYG0 378 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 KLHL9Q9P2J3 617 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 MRPS10P82664 201 aaKnown RBP18.68■□□□□ 0.58
HDAC4-201ENST00000345617 C22orf15Q8WYQ4 148 aa18.68■□□□□ 0.58
HDAC4-201ENST00000345617 HMX1Q9NP08 348 aaPredicted RBP18.68■□□□□ 0.58
HDAC4-201ENST00000345617 SAGE1Q9NXZ1 904 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms