RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 PLPP5Q8NEB5 264 aa16.95■□□□□ 0.3
USF2-202ENST00000343550 SRFBP1Q8NEF9 429 aaKnown RBP16.95■□□□□ 0.3
USF2-202ENST00000343550 DNAJB14Q8TBM8 379 aa16.95■□□□□ 0.3
USF2-202ENST00000343550 REPS1Q96D71 796 aa16.95■□□□□ 0.3
USF2-202ENST00000343550 NPLQ9BXD5 320 aaPredicted RBP16.95■□□□□ 0.3
USF2-202ENST00000343550 C12orf65Q9H3J6 166 aaKnown RBP16.95■□□□□ 0.3
USF2-202ENST00000343550 AGPAT4Q9NRZ5 378 aa16.95■□□□□ 0.3
USF2-202ENST00000343550 PSD3Q9NYI0 1048 aa16.95■□□□□ 0.3
USF2-202ENST00000343550 SLC5A6Q9Y289 635 aa16.95■□□□□ 0.3
USF2-202ENST00000343550 A0A088AWK7 358 aa16.94■□□□□ 0.3
USF2-202ENST00000343550 A0A1W2PQ72 361 aa16.94■□□□□ 0.3
USF2-202ENST00000343550 FAM227AF5H4B4 570 aa16.94■□□□□ 0.3
USF2-202ENST00000343550 SH3BGRLO75368 114 aa16.94■□□□□ 0.3
USF2-202ENST00000343550 CDC123O75794 336 aaPredicted RBP16.94■□□□□ 0.3
USF2-202ENST00000343550 LDLRP01130 860 aa16.94■□□□□ 0.3
USF2-202ENST00000343550 C8orf89P0DMQ9 161 aa16.94■□□□□ 0.3
USF2-202ENST00000343550 ZNF10P21506 573 aaPredicted RBP16.94■□□□□ 0.3
USF2-202ENST00000343550 ARL1P40616 181 aaPredicted RBP16.94■□□□□ 0.3
USF2-202ENST00000343550 NEK2P51955 445 aa16.94■□□□□ 0.3
USF2-202ENST00000343550 RHAGQ02094 409 aa16.94■□□□□ 0.3
USF2-202ENST00000343550 TGM3Q08188 693 aa16.94■□□□□ 0.3
USF2-202ENST00000343550 DDX39BQ13838 428 aaKnown RBP16.94■□□□□ 0.3
USF2-202ENST00000343550 KHDRBS2Q5VWX1 349 aaKnown RBP16.94■□□□□ 0.3
USF2-202ENST00000343550 ZYG11AQ6WRX3 759 aa16.94■□□□□ 0.3
USF2-202ENST00000343550 NDUFAF7Q7L592 441 aa16.94■□□□□ 0.3
USF2-202ENST00000343550 OR4F6Q8NGB9 312 aa16.94■□□□□ 0.3
USF2-202ENST00000343550 TRPC4APQ8TEL6 797 aa16.94■□□□□ 0.3
USF2-202ENST00000343550 METTL21AQ8WXB1 218 aa16.94■□□□□ 0.3
USF2-202ENST00000343550 L3HYPDHQ96EM0 354 aa16.94■□□□□ 0.3
USF2-202ENST00000343550 THOC3Q96J01 351 aaKnown RBP16.94■□□□□ 0.3
USF2-202ENST00000343550 KCNC2Q96PR1 638 aa16.94■□□□□ 0.3
USF2-202ENST00000343550 TMEM237Q96Q45 408 aa16.94■□□□□ 0.3
USF2-202ENST00000343550 SERINC2Q96SA4 455 aa16.94■□□□□ 0.3
USF2-202ENST00000343550 TBCDQ9BTW9 1192 aa16.94■□□□□ 0.3
USF2-202ENST00000343550 RBCK1Q9BYM8 510 aa16.94■□□□□ 0.3
USF2-202ENST00000343550 OR51B5Q9H339 312 aa16.94■□□□□ 0.3
USF2-202ENST00000343550 DMRT3Q9NQL9 472 aa16.94■□□□□ 0.3
USF2-202ENST00000343550 ZNF225Q9UK10 706 aa16.94■□□□□ 0.3
USF2-202ENST00000343550 HIVEP3Q5T1R4 2406 aa16.94■□□□□ 0.3
USF2-202ENST00000343550 IGHV1-45A0A0A0MS14 117 aa16.93■□□□□ 0.3
USF2-202ENST00000343550 MAGEB17A8MXT2 336 aa16.93■□□□□ 0.3
USF2-202ENST00000343550 FOXE1O00358 373 aaPredicted RBP16.93■□□□□ 0.3
USF2-202ENST00000343550 B3GALT2O43825 422 aa16.93■□□□□ 0.3
USF2-202ENST00000343550 OTCP00480 354 aa16.93■□□□□ 0.3
USF2-202ENST00000343550 HPP00738 406 aa16.93■□□□□ 0.3
USF2-202ENST00000343550 COX6A1P12074 109 aa16.93■□□□□ 0.3
USF2-202ENST00000343550 RNH1P13489 461 aaKnown RBP16.93■□□□□ 0.3
USF2-202ENST00000343550 PTX3P26022 381 aaPredicted RBP16.93■□□□□ 0.3
USF2-202ENST00000343550 MTTPP55157 894 aa16.93■□□□□ 0.3
USF2-202ENST00000343550 RPS13P62277 151 aaKnown RBP16.93■□□□□ 0.3
USF2-202ENST00000343550 Q0VFX4 171 aa16.93■□□□□ 0.3
USF2-202ENST00000343550 GGTA1PQ4G0N0 100 aa16.93■□□□□ 0.3
USF2-202ENST00000343550 BANPQ8N9N5 519 aa16.93■□□□□ 0.3
USF2-202ENST00000343550 MTFMTQ96DP5 389 aaKnown RBP16.93■□□□□ 0.3
USF2-202ENST00000343550 CCDC126Q96EE4 140 aa16.93■□□□□ 0.3
USF2-202ENST00000343550 C5orf34Q96MH7 638 aa16.93■□□□□ 0.3
USF2-202ENST00000343550 EPS8L2Q9H6S3 715 aa16.93■□□□□ 0.3
USF2-202ENST00000343550 PRM3Q9NNZ6 103 aa16.93■□□□□ 0.3
USF2-202ENST00000343550 SCN2AQ99250 2005 aa16.93■□□□□ 0.3
USF2-202ENST00000343550 NUP210LQ5VU65 1888 aa16.93■□□□□ 0.3
USF2-202ENST00000343550 SAP18O00422 153 aaKnown RBP16.92■□□□□ 0.3
USF2-202ENST00000343550 RTCAO00442 366 aaKnown RBP16.92■□□□□ 0.3
USF2-202ENST00000343550 B4GALT2O60909 372 aa16.92■□□□□ 0.3
USF2-202ENST00000343550 MYL2P10916 166 aa16.92■□□□□ 0.3
USF2-202ENST00000343550 JAK1P23458 1154 aa16.92■□□□□ 0.3
USF2-202ENST00000343550 BTG2P78543 158 aa16.92■□□□□ 0.3
USF2-202ENST00000343550 ZNF844Q08AG5 666 aa16.92■□□□□ 0.3
USF2-202ENST00000343550 NSDHLQ15738 373 aa16.92■□□□□ 0.3
USF2-202ENST00000343550 LETMD1Q6P1Q0 360 aa16.92■□□□□ 0.3
USF2-202ENST00000343550 LANCL3Q6ZV70 420 aa16.92■□□□□ 0.3
USF2-202ENST00000343550 MAMDC2Q7Z304 686 aaPredicted RBP16.92■□□□□ 0.3
USF2-202ENST00000343550 LURAP1LQ8IV03 231 aa16.92■□□□□ 0.3
USF2-202ENST00000343550 SRRM1Q8IYB3 904 aaKnown RBP16.92■□□□□ 0.3
USF2-202ENST00000343550 MAGEB10Q96LZ2 347 aaPredicted RBP16.92■□□□□ 0.3
USF2-202ENST00000343550 ROGDIQ9GZN7 287 aa16.92■□□□□ 0.3
USF2-202ENST00000343550 ZNF700Q9H0M5 742 aa16.92■□□□□ 0.3
USF2-202ENST00000343550 ZNF160Q9HCG1 818 aa16.92■□□□□ 0.3
USF2-202ENST00000343550 PLLPQ9Y342 182 aa16.92■□□□□ 0.3
USF2-202ENST00000343550 TEX15Q9BXT5 2789 aa16.92■□□□□ 0.3
USF2-202ENST00000343550 NSG1A0A0A6YYJ2 146 aa16.91■□□□□ 0.3
USF2-202ENST00000343550 PSMD12O00232 456 aaPredicted RBP16.91■□□□□ 0.3
USF2-202ENST00000343550 CLDN1O95832 211 aa16.91■□□□□ 0.3
USF2-202ENST00000343550 CPA3P15088 417 aa16.91■□□□□ 0.3
USF2-202ENST00000343550 ATP5A1P25705 553 aaKnown RBP16.91■□□□□ 0.3
USF2-202ENST00000343550 CERS1P27544 350 aa16.91■□□□□ 0.3
USF2-202ENST00000343550 TSFMP43897 325 aaKnown RBP16.91■□□□□ 0.3
USF2-202ENST00000343550 LIM2P55344 173 aa16.91■□□□□ 0.3
USF2-202ENST00000343550 PHEXP78562 749 aa16.91■□□□□ 0.3
USF2-202ENST00000343550 EEF1A2Q05639 463 aaKnown RBP16.91■□□□□ 0.3
USF2-202ENST00000343550 CUL3Q13618 768 aa16.91■□□□□ 0.3
USF2-202ENST00000343550 ZNF169Q14929 603 aaPredicted RBP16.91■□□□□ 0.3
USF2-202ENST00000343550 ABRAXAS2Q15018 415 aa16.91■□□□□ 0.3
USF2-202ENST00000343550 PCOLCEQ15113 449 aa16.91■□□□□ 0.3
USF2-202ENST00000343550 TLR1Q15399 786 aa16.91■□□□□ 0.3
USF2-202ENST00000343550 AP5B1Q2VPB7 878 aa16.91■□□□□ 0.3
USF2-202ENST00000343550 FRG2Q64ET8 278 aa16.91■□□□□ 0.3
USF2-202ENST00000343550 TTC19Q6DKK2 380 aaPredicted RBP16.91■□□□□ 0.3
USF2-202ENST00000343550 OR4C11Q6IEV9 310 aa16.91■□□□□ 0.3
USF2-202ENST00000343550 ISLR2Q6UXK2 745 aa16.91■□□□□ 0.3
USF2-202ENST00000343550 ZNF793Q6ZN11 406 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms