RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 INPP5KQ9BT40 448 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 MS4A12Q9NXJ0 267 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 COLEC10Q9Y6Z7 277 aa12.99□□□□□ -0.33
TMEM248-201ENST00000341567 FAM172BPA6NC97 362 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 UBFD1O14562 309 aaKnown RBP12.98□□□□□ -0.33
TMEM248-201ENST00000341567 SCN2BO60939 215 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 POLR2CP19387 275 aaPredicted RBP12.98□□□□□ -0.33
TMEM248-201ENST00000341567 GADD45AP24522 165 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 KDELR2P33947 212 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 CLCN2P51788 898 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 CLCN4P51793 760 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 BTN3A2P78410 334 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 PCDH1Q08174 1060 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 ELAVL3Q14576 367 aaKnown RBP12.98□□□□□ -0.33
TMEM248-201ENST00000341567 SUZ12Q15022 739 aaKnown RBP12.98□□□□□ -0.33
TMEM248-201ENST00000341567 GPR68Q15743 365 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 CLEC14AQ86T13 490 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 CCDC116Q8IYX3 515 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 OR8H3Q8N146 312 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 METTL27Q8N6F8 245 aaPredicted RBP12.98□□□□□ -0.33
TMEM248-201ENST00000341567 ZNF433Q8N7K0 673 aaPredicted RBP12.98□□□□□ -0.33
TMEM248-201ENST00000341567 MFSD2AQ8NA29 543 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 HUS1BQ8NHY5 278 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 NETO1Q8TDF5 533 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 PEX13Q92968 403 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 SORBS1Q9BX66 1292 aaKnown RBP12.98□□□□□ -0.33
TMEM248-201ENST00000341567 ASPNQ9BXN1 380 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 MMP27Q9H306 513 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 BEX1Q9HBH7 125 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 DNMT3BQ9UBC3 853 aaKnown RBP12.98□□□□□ -0.33
TMEM248-201ENST00000341567 OARD1Q9Y530 152 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 TLX2O43763 284 aaPredicted RBP12.98□□□□□ -0.33
TMEM248-201ENST00000341567 LAMP1P11279 417 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 C4BPBP20851 252 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 SDC2P34741 201 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 SMIM11AP58511 58 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 SLC9A5Q14940 896 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 CYBRD1Q53TN4 286 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 CTSL3PQ5NE16 218 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 KIAA1161Q6NSJ0 714 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 HMBOX1Q6NT76 420 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 FBXO46Q6PJ61 603 aaPredicted RBP12.98□□□□□ -0.33
TMEM248-201ENST00000341567 FUNDC1Q8IVP5 155 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 Q8N9G6 341 aaPredicted RBP12.98□□□□□ -0.33
TMEM248-201ENST00000341567 TSPEARQ8WU66 669 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 FGF13Q92913 245 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 SMARCD2Q92925 531 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 GPR83Q9NYM4 423 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 LHX3Q9UBR4 397 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 A0A1B0GW55 424 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 WASH4PA8MWX3 477 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 HLA-DQA2P01906 255 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 DUX4L2P0CJ85 424 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 DUX4L3P0CJ86 424 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 DUX4L4P0CJ87 422 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 DUX4L5P0CJ88 424 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 DUX4L6P0CJ89 424 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 DUX4L7P0CJ90 424 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 LAMP2P13473 410 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 SELPLGQ14242 412 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 TOMM20Q15388 145 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 TEAD4Q15561 434 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 ZNHIT3Q15649 155 aaPredicted RBP12.98□□□□□ -0.33
TMEM248-201ENST00000341567 WSCD2Q2TBF2 565 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 ATP6V1C2Q8NEY4 427 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 POP5Q969H6 163 aaKnown RBP12.98□□□□□ -0.33
TMEM248-201ENST00000341567 GAL3ST4Q96RP7 486 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 LTB4R2Q9NPC1 389 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 DUX4Q9UBX2 424 aa12.98□□□□□ -0.33
TMEM248-201ENST00000341567 TRBC2A0A5B9 178 aa12.97□□□□□ -0.33
TMEM248-201ENST00000341567 TUBA1BP68363 451 aa12.97□□□□□ -0.33
TMEM248-201ENST00000341567 CDK6Q00534 326 aa12.97□□□□□ -0.33
TMEM248-201ENST00000341567 CDK5R2Q13319 367 aa12.97□□□□□ -0.33
TMEM248-201ENST00000341567 TUBA1AQ71U36 451 aa12.97□□□□□ -0.33
TMEM248-201ENST00000341567 TCEANCQ8N8B7 351 aa12.97□□□□□ -0.33
TMEM248-201ENST00000341567 TSACCQ96A04 125 aaPredicted RBP12.97□□□□□ -0.33
TMEM248-201ENST00000341567 RHBDF1Q96CC6 855 aa12.97□□□□□ -0.33
TMEM248-201ENST00000341567 FEVQ99581 238 aa12.97□□□□□ -0.33
TMEM248-201ENST00000341567 CHIAQ9BZP6 476 aa12.97□□□□□ -0.33
TMEM248-201ENST00000341567 POPDC3Q9HBV1 291 aa12.97□□□□□ -0.33
TMEM248-201ENST00000341567 TM9SF3Q9HD45 589 aa12.97□□□□□ -0.33
TMEM248-201ENST00000341567 CARD8Q9Y2G2 431 aa12.97□□□□□ -0.33
TMEM248-201ENST00000341567 NINQ8N4C6 2090 aa12.97□□□□□ -0.33
TMEM248-201ENST00000341567 CNOT1A5YKK6 2376 aaKnown RBP12.97□□□□□ -0.33
TMEM248-201ENST00000341567 PPP5CP53041 499 aa12.97□□□□□ -0.33
TMEM248-201ENST00000341567 NPRL3Q12980 569 aa12.97□□□□□ -0.33
TMEM248-201ENST00000341567 DUOXA1Q1HG43 343 aa12.97□□□□□ -0.33
TMEM248-201ENST00000341567 OR4N5Q8IXE1 308 aa12.97□□□□□ -0.33
TMEM248-201ENST00000341567 NPAS3Q8IXF0 933 aa12.97□□□□□ -0.33
TMEM248-201ENST00000341567 OR5AR1Q8NGP9 310 aa12.97□□□□□ -0.33
TMEM248-201ENST00000341567 RIPOR3Q96MK2 946 aa12.97□□□□□ -0.33
TMEM248-201ENST00000341567 SLC22A4Q9H015 551 aa12.97□□□□□ -0.33
TMEM248-201ENST00000341567 KRCC1Q9NPI7 259 aaPredicted RBP12.97□□□□□ -0.33
TMEM248-201ENST00000341567 UTS2RQ9UKP6 389 aa12.97□□□□□ -0.33
TMEM248-201ENST00000341567 APC2O95996 2303 aa12.97□□□□□ -0.33
TMEM248-201ENST00000341567 URADA6NGE7 173 aa12.97□□□□□ -0.33
TMEM248-201ENST00000341567 IL3P08700 152 aa12.97□□□□□ -0.33
TMEM248-201ENST00000341567 C7P10643 843 aa12.97□□□□□ -0.33
TMEM248-201ENST00000341567 ATF4P18848 351 aaPredicted RBP12.97□□□□□ -0.33
TMEM248-201ENST00000341567 MC1RQ01726 317 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms