RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 HCAR3P49019 387 aa10.06□□□□□ -0.8
ATXN3-201ENST00000340660 KIF5AQ12840 1032 aa10.06□□□□□ -0.8
ATXN3-201ENST00000340660 PTP4A2Q12974 167 aa10.06□□□□□ -0.8
ATXN3-201ENST00000340660 DCST1Q5T197 706 aa10.06□□□□□ -0.8
ATXN3-201ENST00000340660 SUSD1Q6UWL2 747 aa10.06□□□□□ -0.8
ATXN3-201ENST00000340660 CYP4V2Q6ZWL3 525 aaPredicted RBP10.06□□□□□ -0.8
ATXN3-201ENST00000340660 CREG2Q8IUH2 290 aa10.06□□□□□ -0.8
ATXN3-201ENST00000340660 FAM71AQ8IYT1 594 aa10.06□□□□□ -0.8
ATXN3-201ENST00000340660 APCDD1LQ8NCL9 501 aa10.06□□□□□ -0.8
ATXN3-201ENST00000340660 FAM13CQ8NE31 585 aa10.06□□□□□ -0.8
ATXN3-201ENST00000340660 MRAPQ8TCY5 172 aa10.06□□□□□ -0.8
ATXN3-201ENST00000340660 CCDC47Q96A33 483 aaKnown RBP10.06□□□□□ -0.8
ATXN3-201ENST00000340660 RHOVQ96L33 236 aa10.06□□□□□ -0.8
ATXN3-201ENST00000340660 FAM81BQ96LP2 452 aa10.06□□□□□ -0.8
ATXN3-201ENST00000340660 ZFP3Q96NJ6 502 aa10.06□□□□□ -0.8
ATXN3-201ENST00000340660 SLITRK2Q9H156 845 aa10.06□□□□□ -0.8
ATXN3-201ENST00000340660 LIN28AQ9H9Z2 209 aaKnown RBP10.06□□□□□ -0.8
ATXN3-201ENST00000340660 LANCL2Q9NS86 450 aa10.06□□□□□ -0.8
ATXN3-201ENST00000340660 GAR1Q9NY12 217 aaKnown RBP10.06□□□□□ -0.8
ATXN3-201ENST00000340660 ZNF223Q9UK11 482 aaPredicted RBP10.06□□□□□ -0.8
ATXN3-201ENST00000340660 FBXW2Q9UKT8 454 aa10.06□□□□□ -0.8
ATXN3-201ENST00000340660 IKZF3Q9UKT9 509 aa10.06□□□□□ -0.8
ATXN3-201ENST00000340660 SH2B3Q9UQQ2 575 aa10.06□□□□□ -0.8
ATXN3-201ENST00000340660 YARS2Q9Y2Z4 477 aaKnown RBP10.06□□□□□ -0.8
ATXN3-201ENST00000340660 PRR14LQ5THK1 2151 aa10.06□□□□□ -0.8
ATXN3-201ENST00000340660 DNAH3Q8TD57 4116 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 LRRC3CA6NJW4 275 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 P2RX6O15547 441 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 PRKNO60260 465 aaPredicted RBP10.05□□□□□ -0.8
ATXN3-201ENST00000340660 OR2J2O76002 312 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 F13A1P00488 732 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 PF4P02776 101 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 MMEP08473 750 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 CCL3P10147 92 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 PTNP21246 168 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 CD9P21926 228 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 GGT5P36269 586 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 ZNF165P49910 485 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 STX17P56962 302 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 FAM53BQ14153 422 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 FAM182AQ5T1J6 154 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 ERMARDQ5T6L9 678 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 TMCO3Q6UWJ1 677 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 LRRC25Q8N386 305 aaPredicted RBP10.05□□□□□ -0.8
ATXN3-201ENST00000340660 ZDHHC22Q8N966 263 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 SLC30A5Q8TAD4 765 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 ABHD4Q8TB40 342 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 ZCCHC10Q8TBK6 192 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 GATAD2BQ8WXI9 593 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 ASB15Q8WXK1 588 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 WDYHV1Q96HA8 205 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 TMX3Q96JJ7 454 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 NTMT1Q9BV86 223 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 SELENOOQ9BVL4 669 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 OPN3Q9H1Y3 402 aaPredicted RBP10.05□□□□□ -0.8
ATXN3-201ENST00000340660 VPS16Q9H269 839 aa10.05□□□□□ -0.8
ATXN3-201ENST00000340660 A0A1W2PNV4 684 aa10.04□□□□□ -0.8
ATXN3-201ENST00000340660 SLC5A10A0PJK1 596 aa10.04□□□□□ -0.8
ATXN3-201ENST00000340660 OR2A25A4D2G3 310 aa10.04□□□□□ -0.8
ATXN3-201ENST00000340660 H0YIG0 161 aa10.04□□□□□ -0.8
ATXN3-201ENST00000340660 BUD23O43709 281 aaKnown RBP10.04□□□□□ -0.8
ATXN3-201ENST00000340660 GCH1P30793 250 aa10.04□□□□□ -0.8
ATXN3-201ENST00000340660 PIGAP37287 484 aa10.04□□□□□ -0.8
ATXN3-201ENST00000340660 AVPR1BP47901 424 aa10.04□□□□□ -0.8
ATXN3-201ENST00000340660 HK2P52789 917 aa10.04□□□□□ -0.8
ATXN3-201ENST00000340660 BPIFB4P59827 614 aa10.04□□□□□ -0.8
ATXN3-201ENST00000340660 RPL7AP62424 266 aaKnown RBP10.04□□□□□ -0.8
ATXN3-201ENST00000340660 KCNJ2P63252 427 aa10.04□□□□□ -0.8
ATXN3-201ENST00000340660 OGDHQ02218 1023 aa10.04□□□□□ -0.8
ATXN3-201ENST00000340660 SRSF4Q08170 494 aaKnown RBP10.04□□□□□ -0.8
ATXN3-201ENST00000340660 DTX2Q86UW9 622 aa10.04□□□□□ -0.8
ATXN3-201ENST00000340660 TRIM59Q8IWR1 403 aa10.04□□□□□ -0.8
ATXN3-201ENST00000340660 ZNF398Q8TD17 642 aa10.04□□□□□ -0.8
ATXN3-201ENST00000340660 STARD4Q96DR4 205 aa10.04□□□□□ -0.8
ATXN3-201ENST00000340660 JMJD8Q96S16 334 aa10.04□□□□□ -0.8
ATXN3-201ENST00000340660 DIRC2Q96SL1 478 aa10.04□□□□□ -0.8
ATXN3-201ENST00000340660 SACM1LQ9NTJ5 587 aa10.04□□□□□ -0.8
ATXN3-201ENST00000340660 PCSK1NQ9UHG2 260 aa10.04□□□□□ -0.8
ATXN3-201ENST00000340660 AMACRQ9UHK6 382 aa10.04□□□□□ -0.8
ATXN3-201ENST00000340660 CLOCKO15516 846 aa10.03□□□□□ -0.8
ATXN3-201ENST00000340660 FKBP9O95302 570 aa10.03□□□□□ -0.8
ATXN3-201ENST00000340660 BPNT1O95861 308 aa10.03□□□□□ -0.8
ATXN3-201ENST00000340660 HPXP02790 462 aa10.03□□□□□ -0.8
ATXN3-201ENST00000340660 PEPDP12955 493 aa10.03□□□□□ -0.8
ATXN3-201ENST00000340660 SLC6A12P48065 614 aa10.03□□□□□ -0.8
ATXN3-201ENST00000340660 GSCP56915 257 aaPredicted RBP10.03□□□□□ -0.8
ATXN3-201ENST00000340660 LOXL3P58215 753 aa10.03□□□□□ -0.8
ATXN3-201ENST00000340660 UBA52P62987 128 aaKnown RBP10.03□□□□□ -0.8
ATXN3-201ENST00000340660 KRT85P78386 507 aa10.03□□□□□ -0.8
ATXN3-201ENST00000340660 TAGLNQ01995 201 aaKnown RBP10.03□□□□□ -0.8
ATXN3-201ENST00000340660 GRB7Q14451 532 aa10.03□□□□□ -0.8
ATXN3-201ENST00000340660 NOMO1Q15155 1222 aa10.03□□□□□ -0.8
ATXN3-201ENST00000340660 ZNF672Q499Z4 452 aaPredicted RBP10.03□□□□□ -0.8
ATXN3-201ENST00000340660 ZDHHC20Q5W0Z9 365 aa10.03□□□□□ -0.8
ATXN3-201ENST00000340660 VWA1Q6PCB0 445 aa10.03□□□□□ -0.8
ATXN3-201ENST00000340660 RTL4Q6ZR62 310 aa10.03□□□□□ -0.8
ATXN3-201ENST00000340660 SCUBE1Q8IWY4 988 aa10.03□□□□□ -0.8
ATXN3-201ENST00000340660 SVOPLQ8N434 492 aa10.03□□□□□ -0.8
ATXN3-201ENST00000340660 OR2L3Q8NG85 312 aa10.03□□□□□ -0.8
ATXN3-201ENST00000340660 OR2L8Q8NGY9 312 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms