RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 GLYATL2Q8WU03 294 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 CHFRQ96EP1 664 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 WDFY2Q96P53 400 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 SSX3Q99909 188 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 ZYG11BQ9C0D3 744 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 OR51J1Q9H342 316 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 UCK1Q9HA47 277 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 EMC7Q9NPA0 242 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 SEMA4BQ9NPR2 832 aaPredicted RBP9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 MS4A12Q9NXJ0 267 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 OR6C2Q9NZP2 312 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 KLHL8Q9P2G9 620 aaPredicted RBP9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 NEUROG3Q9Y4Z2 214 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 A0A1W2PPE3 182 aa9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 C2orf74A8MZ97 194 aa9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 IFNA4P05014 189 aa9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 PRG2P13727 222 aa9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 PAICSP22234 425 aaKnown RBP9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 SDC2P34741 201 aa9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 CAMK1Q14012 370 aa9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 ERV3-1Q14264 604 aa9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 GANABQ14697 944 aaKnown RBP9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 TAF1AQ15573 450 aaPredicted RBP9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 DDI2Q5TDH0 399 aa9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 NCBP2-AS2Q69YL0 99 aa9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 FAM109BQ6ICB4 259 aaPredicted RBP9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 PDE12Q6L8Q7 609 aaKnown RBP9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 ZNF613Q6PF04 617 aa9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 SHQ1Q6PI26 577 aaKnown RBP9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 PUSL1Q8N0Z8 303 aaKnown RBP9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 ZNF548Q8NEK5 533 aaPredicted RBP9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 MDGA1Q8NFP4 955 aa9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 OR52K2Q8NGK3 314 aa9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 OR14A16Q8NHC5 309 aa9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 RXFP4Q8TDU9 374 aa9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 ULK4Q96C45 1275 aa9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 MOGAT1Q96PD6 335 aa9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 PRKD2Q9BZL6 878 aa9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 SAP130Q9H0E3 1048 aa9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 MROH8Q9H579 483 aa9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 COX16Q9P0S2 106 aa9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 FAM198AQ9UFP1 575 aa9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 LAMP5Q9UJQ1 280 aa9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 SAMHD1Q9Y3Z3 626 aaKnown RBP9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 KLK4Q9Y5K2 254 aa9.27□□□□□ -0.93
PTCHD4-201ENST00000339488 ANKDD1BA6NHY2 528 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 ZNF729A6NN14 1252 aaPredicted RBP9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 MPTX1A8MV57 137 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 AZIN1O14977 448 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 SEMA7AO75326 666 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 CRCPO75575 148 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 MATN4O95460 622 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 B3GALT4O96024 378 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 HIST1H2AGP0C0S8 130 aaPredicted RBP9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 HIST1H2ADP20671 130 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 SLC1A2P43004 574 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 CSRP3P50461 194 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 ZP1P60852 638 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 POU4F2Q12837 409 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 GK2Q14410 553 aaPredicted RBP9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 DGKKQ5KSL6 1271 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 GCNT6Q5T4J0 391 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 HIST2H2AA3Q6FI13 130 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 OR7E24Q6IFN5 339 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 WASH2PQ6VEQ5 465 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 MACC1Q6ZN28 852 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 TAS1R3Q7RTX0 852 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 MIB1Q86YT6 1006 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 NANOGP1Q8N7R0 232 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 ESAMQ96AP7 390 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 C14orf144Q96I85 54 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 HIST1H2AHQ96KK5 128 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 HIST1H2AJQ99878 128 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 SOX7Q9BT81 388 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 PDCD10Q9BUL8 212 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 TFB2MQ9H5Q4 396 aaKnown RBP9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 GBA2Q9HCG7 927 aaPredicted RBP9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 EQTNQ9NQ60 294 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 CRTAC1Q9NQ79 661 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 POMT2Q9UKY4 750 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 KCNK7Q9Y2U2 307 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 BRCA1P38398 1863 aaKnown RBP9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 GPR171O14626 319 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 IL6P05231 212 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 CBSLP0DN79 551 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 LAP3P28838 519 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 LCN1P31025 176 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 CBSP35520 551 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 ARSDP51689 593 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 DNAJB13P59910 316 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 PON3Q15166 354 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 DUOXA1Q1HG43 343 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 ZNF678Q5SXM1 525 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 ZPBP2Q6X784 338 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 CRYBG2Q8N1P7 616 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 PTGR2Q8N8N7 351 aaPredicted RBP9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 WDSUB1Q8N9V3 476 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 OR2T11Q8NH01 316 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 WFIKKN2Q8TEU8 576 aa9.26□□□□□ -0.93
PTCHD4-201ENST00000339488 OTUB1Q96FW1 271 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms