RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 TCEA2Q15560 299 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 TOR2AQ5JU69 321 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 RNF130Q86XS8 419 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 MFSD4AQ8N468 514 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 ZNF548Q8NEK5 533 aaPredicted RBP12.74□□□□□ -0.37
COL2A1-201ENST00000337299 RFKQ969G6 155 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 MYO19Q96H55 970 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 ZNF419Q96HQ0 510 aaPredicted RBP12.74□□□□□ -0.37
COL2A1-201ENST00000337299 NARFLQ9H6Q4 476 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 A0A1W2PRB8 838 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 GATBO75879 557 aaKnown RBP12.74□□□□□ -0.37
COL2A1-201ENST00000337299 C6orf47O95873 294 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 SBK3P0C264 359 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 PVALBP20472 110 aaPredicted RBP12.74□□□□□ -0.37
COL2A1-201ENST00000337299 MLLT3P42568 568 aaPredicted RBP12.74□□□□□ -0.37
COL2A1-201ENST00000337299 MASP1P48740 699 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 MLLT6P55198 1093 aaPredicted RBP12.74□□□□□ -0.37
COL2A1-201ENST00000337299 MRPS6P82932 125 aaKnown RBP12.74□□□□□ -0.37
COL2A1-201ENST00000337299 SF1Q15637 639 aaKnown RBP12.74□□□□□ -0.37
COL2A1-201ENST00000337299 NOXRED1Q6NXP6 359 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 LYPD8Q6UX82 237 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 GALNT13Q8IUC8 556 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 CREB3L1Q96BA8 519 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 NXPE2Q96DL1 559 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.74□□□□□ -0.37
COL2A1-201ENST00000337299 GORASP2Q9H8Y8 452 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 OR2A25A4D2G3 310 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 HCN1O60741 890 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 ALDH1A1P00352 501 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 RPS5P46782 204 aaKnown RBP12.74□□□□□ -0.37
COL2A1-201ENST00000337299 YBEYP58557 167 aaPredicted RBP12.74□□□□□ -0.37
COL2A1-201ENST00000337299 CDC20Q12834 499 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 ZNF791Q3KP31 576 aaPredicted RBP12.74□□□□□ -0.37
COL2A1-201ENST00000337299 TMED4Q7Z7H5 227 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 IQCHQ86VS3 1027 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 TP53I13Q8NBR0 393 aaPredicted RBP12.74□□□□□ -0.37
COL2A1-201ENST00000337299 OR2T11Q8NH01 316 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 DOK1Q99704 481 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 TMEM106CQ9BVX2 250 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 OR10A4Q9H209 315 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 CRTAC1Q9NQ79 661 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 TMEM39AQ9NV64 488 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 OR2AT4A6NND4 320 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 GPR39O43194 453 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 ENTPD6O75354 484 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 PAHP00439 452 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 ASGR1P07306 291 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 ITGAMP11215 1152 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 PTPN2P17706 415 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 TACR2P21452 398 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 GGT2P36268 569 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 RPL4P36578 427 aaKnown RBP12.74□□□□□ -0.37
COL2A1-201ENST00000337299 ALKAL2Q6UX46 152 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 GLCCI1Q86VQ1 547 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 MEX3DQ86XN8 651 aaKnown RBP12.74□□□□□ -0.37
COL2A1-201ENST00000337299 CACUL1Q86Y37 369 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 NPAS3Q8IXF0 933 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 DNAJC22Q8N4W6 341 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 OR51G2Q8NGK0 314 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 EVA1BQ9NVM1 165 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 OR6C2Q9NZP2 312 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 TNFRSF10DQ9UBN6 386 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 LOC100509620A0A075B734 347 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 FMO6PO60774 539 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 ZNF780AO75290 641 aaPredicted RBP12.73□□□□□ -0.37
COL2A1-201ENST00000337299 SPDEFO95238 335 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 RAB36O95755 333 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 IQCF3P0C7M6 154 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 RGS8P57771 180 aaPredicted RBP12.73□□□□□ -0.37
COL2A1-201ENST00000337299 TARBP2Q15633 366 aaKnown RBP12.73□□□□□ -0.37
COL2A1-201ENST00000337299 SLC35F1Q5T1Q4 408 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 PLAG1Q6DJT9 500 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 SLC16A12Q6ZSM3 486 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 RAB42Q8N4Z0 105 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 OR8K5Q8NH50 307 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 OR8K3Q8NH51 312 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 SMIM14Q96QK8 99 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 MCCC1Q96RQ3 725 aaPredicted RBP12.73□□□□□ -0.37
COL2A1-201ENST00000337299 ZNF471Q9BX82 626 aaPredicted RBP12.73□□□□□ -0.37
COL2A1-201ENST00000337299 SLIRPQ9GZT3 109 aaKnown RBP12.73□□□□□ -0.37
COL2A1-201ENST00000337299 SLC32A1Q9H598 525 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 CDCP1Q9H5V8 836 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 MRM3Q9HC36 420 aaKnown RBP12.73□□□□□ -0.37
COL2A1-201ENST00000337299 ATP13A2Q9NQ11 1180 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 FKBP7Q9Y680 259 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 GFRA2O00451 464 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 SOCS7O14512 581 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 ACSL4O60488 711 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 TBL1XO60907 577 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 PAPSS2O95340 614 aaPredicted RBP12.73□□□□□ -0.37
COL2A1-201ENST00000337299 IGSF6O95976 241 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 ARSBP15848 533 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 POLR2CP19387 275 aaPredicted RBP12.73□□□□□ -0.37
COL2A1-201ENST00000337299 FAUP35544 74 aaKnown RBP12.73□□□□□ -0.37
COL2A1-201ENST00000337299 MNDAP41218 407 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 NRIP1P48552 1158 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 CRYBB1P53674 252 aaPredicted RBP12.73□□□□□ -0.37
COL2A1-201ENST00000337299 FGL2Q14314 439 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 CEACAM20Q6UY09 585 aa12.73□□□□□ -0.37
COL2A1-201ENST00000337299 ZNF782Q6ZMW2 699 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms