RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 SOCS5O75159 536 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 UGT2B17O75795 530 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 B3GALT4O96024 378 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 FHP07954 510 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 C6P13671 934 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 CEBPBP17676 345 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 TBPL1P62380 186 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 IFITM3Q01628 133 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 LRRC26Q2I0M4 334 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 RNASE12Q5GAN4 147 aaKnown RBP6.22□□□□□ -1.41
HMG20A-201ENST00000336216 HLA-DQA1Q5Y7H0 255 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 TRIQKQ629K1 86 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 KANK2Q63ZY3 851 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 ZNF544Q6NX49 715 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 TMPRSS11AQ6ZMR5 421 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 ZNF730Q6ZMV8 503 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 ZNF517Q6ZMY9 492 aaPredicted RBP6.22□□□□□ -1.41
HMG20A-201ENST00000336216 MACC1Q6ZN28 852 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 VASH1Q7L8A9 365 aaPredicted RBP6.22□□□□□ -1.41
HMG20A-201ENST00000336216 ZNF551Q7Z340 670 aaPredicted RBP6.22□□□□□ -1.41
HMG20A-201ENST00000336216 TRIM69Q86WT6 500 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 DPP10Q8N608 796 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 HUS1BQ8NHY5 278 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 SLC35B4Q969S0 331 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 UHRF1Q96T88 793 aaPredicted RBP6.22□□□□□ -1.41
HMG20A-201ENST00000336216 MMP28Q9H239 520 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 ARNT2Q9HBZ2 717 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 MOV10Q9HCE1 1003 aaKnown RBP6.22□□□□□ -1.41
HMG20A-201ENST00000336216 PRELID1Q9Y255 219 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 CARD8Q9Y2G2 431 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 WDR87Q6ZQQ6 2873 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 TTC28Q96AY4 2481 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 SEMA3DO95025 777 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 HLA-DQA2P01906 255 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 C9P02748 559 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 CKMT1AP12532 417 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 ETFAP13804 333 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 HMGA1P17096 107 aaKnown RBP6.22□□□□□ -1.41
HMG20A-201ENST00000336216 BMP7P18075 431 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 POLR2CP19387 275 aaPredicted RBP6.22□□□□□ -1.41
HMG20A-201ENST00000336216 GGT1P19440 569 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 KELP23276 732 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 EPHA2P29317 976 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 GSTM5P46439 218 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 ZNF140P52738 457 aaPredicted RBP6.22□□□□□ -1.41
HMG20A-201ENST00000336216 UGT2B15P54855 530 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 SRP54P61011 504 aaKnown RBP6.22□□□□□ -1.41
HMG20A-201ENST00000336216 BTN3A2P78410 334 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 RGS1Q08116 209 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 GRSF1Q12849 480 aaKnown RBP eCLIP6.22□□□□□ -1.41
HMG20A-201ENST00000336216 TOMM20Q15388 145 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 ANGPT1Q15389 498 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 AGAP7PQ5VUJ5 663 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 LHX8Q68G74 356 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 XAF1Q6GPH4 301 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 ZFAND4Q86XD8 727 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 MEX3DQ86XN8 651 aaKnown RBP6.22□□□□□ -1.41
HMG20A-201ENST00000336216 DTX3Q8N9I9 347 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 OR5AR1Q8NGP9 310 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 TRIM63Q969Q1 353 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 PYURFQ96I23 114 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 HSH2DQ96JZ2 352 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 UBXN10Q96LJ8 280 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 OSBPL10Q9BXB5 764 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 HDHD2Q9H0R4 259 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 OR51V1Q9H2C8 321 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 CLN6Q9NWW5 311 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 GPR83Q9NYM4 423 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 GPRC5BQ9NZH0 403 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 MKL2Q9ULH7 1088 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 HTTP42858 3142 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 A0A1W2PQU0 124 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 SLC35F4A4IF30 521 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 ANKRD34BA5PLL1 514 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 SOBPA7XYQ1 873 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 NUAK1O60285 661 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 NME6O75414 186 aaPredicted RBP6.22□□□□□ -1.41
HMG20A-201ENST00000336216 UPK1BO75841 260 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 TIMP1P01033 207 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 LAMP2P13473 410 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 ITGA2P17301 1181 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 KRT20P35900 424 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 CAPZA2P47755 286 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 HNMTP50135 292 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 SCARB2Q14108 478 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 RUNDC3AQ59EK9 446 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 CTSL3PQ5NE16 218 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 CXorf57Q6NSI4 855 aaKnown RBP6.22□□□□□ -1.41
HMG20A-201ENST00000336216 PLEKHM3Q6ZWE6 761 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 ERN2Q76MJ5 926 aaKnown RBP6.22□□□□□ -1.41
HMG20A-201ENST00000336216 CHMP1BQ7LBR1 199 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 B3GNT8Q7Z7M8 397 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 CDH24Q86UP0 819 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 MRPL43Q8N983 215 aaKnown RBP6.22□□□□□ -1.41
HMG20A-201ENST00000336216 MINDY2Q8NBR6 621 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 ZNF740Q8NDX6 193 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 RHOXF1Q8NHV9 184 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 FGF13Q92913 245 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 MUL1Q969V5 352 aa6.22□□□□□ -1.41
HMG20A-201ENST00000336216 TSACCQ96A04 125 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms