RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 MARCH9Q86YJ5 346 aa20.34■□□□□ 0.85
TPM1-204ENST00000334895 FAM9CQ8IZT9 166 aa20.34■□□□□ 0.85
TPM1-204ENST00000334895 CA13Q8N1Q1 262 aa20.34■□□□□ 0.85
TPM1-204ENST00000334895 TMEM132CQ8N3T6 1108 aa20.34■□□□□ 0.85
TPM1-204ENST00000334895 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.34■□□□□ 0.85
TPM1-204ENST00000334895 CLMPQ9H6B4 373 aa20.34■□□□□ 0.85
TPM1-204ENST00000334895 ACTR5Q9H9F9 607 aaPredicted RBP20.34■□□□□ 0.85
TPM1-204ENST00000334895 SLC52A3Q9NQ40 469 aa20.34■□□□□ 0.85
TPM1-204ENST00000334895 MRGBPQ9NV56 204 aa20.34■□□□□ 0.85
TPM1-204ENST00000334895 ARL8BQ9NVJ2 186 aa20.34■□□□□ 0.85
TPM1-204ENST00000334895 LYARQ9NX58 379 aaKnown RBP20.34■□□□□ 0.85
TPM1-204ENST00000334895 SLC39A1Q9NY26 324 aa20.34■□□□□ 0.85
TPM1-204ENST00000334895 PCDHB3Q9Y5E6 796 aa20.34■□□□□ 0.85
TPM1-204ENST00000334895 KNTC1P50748 2209 aa20.34■□□□□ 0.85
TPM1-204ENST00000334895 CCDC187A0A096LP49 1063 aa20.33■□□□□ 0.84
TPM1-204ENST00000334895 PROM1O43490 865 aa20.33■□□□□ 0.84
TPM1-204ENST00000334895 PRMT3O60678 531 aa20.33■□□□□ 0.84
TPM1-204ENST00000334895 PRPS1L1P21108 318 aa20.33■□□□□ 0.84
TPM1-204ENST00000334895 ALAS2P22557 587 aa20.33■□□□□ 0.84
TPM1-204ENST00000334895 GSTM5P46439 218 aa20.33■□□□□ 0.84
TPM1-204ENST00000334895 MAT1AQ00266 395 aaKnown RBP20.33■□□□□ 0.84
TPM1-204ENST00000334895 C2orf80Q0P641 193 aa20.33■□□□□ 0.84
TPM1-204ENST00000334895 PRSS53Q2L4Q9 553 aa20.33■□□□□ 0.84
TPM1-204ENST00000334895 C18orf63Q68DL7 685 aa20.33■□□□□ 0.84
TPM1-204ENST00000334895 GPR180Q86V85 440 aa20.33■□□□□ 0.84
TPM1-204ENST00000334895 CACTIN-AS1Q8N1I8 211 aa20.33■□□□□ 0.84
TPM1-204ENST00000334895 MVB12AQ96EY5 273 aa20.33■□□□□ 0.84
TPM1-204ENST00000334895 MMABQ96EY8 250 aaPredicted RBP20.33■□□□□ 0.84
TPM1-204ENST00000334895 CSF3RQ99062 836 aa20.33■□□□□ 0.84
TPM1-204ENST00000334895 NPLQ9BXD5 320 aaPredicted RBP20.33■□□□□ 0.84
TPM1-204ENST00000334895 LYRM4Q9HD34 91 aa20.33■□□□□ 0.84
TPM1-204ENST00000334895 HCN3Q9P1Z3 774 aa20.33■□□□□ 0.84
TPM1-204ENST00000334895 NDOR1Q9UHB4 597 aa20.33■□□□□ 0.84
TPM1-204ENST00000334895 SRPK3Q9UPE1 567 aa20.33■□□□□ 0.84
TPM1-204ENST00000334895 WBP11Q9Y2W2 641 aaKnown RBP20.33■□□□□ 0.84
TPM1-204ENST00000334895 MAU2Q9Y6X3 613 aa20.33■□□□□ 0.84
TPM1-204ENST00000334895 CACNA1AO00555 2505 aa20.33■□□□□ 0.84
TPM1-204ENST00000334895 A0A1B0GX78 115 aa20.32■□□□□ 0.84
TPM1-204ENST00000334895 FAM149AA5PLN7 773 aa20.32■□□□□ 0.84
TPM1-204ENST00000334895 H0YIG0 161 aa20.32■□□□□ 0.84
TPM1-204ENST00000334895 SCAMP2O15127 329 aaKnown RBP20.32■□□□□ 0.84
TPM1-204ENST00000334895 CHST10O43529 356 aa20.32■□□□□ 0.84
TPM1-204ENST00000334895 UBOX5O94941 541 aa20.32■□□□□ 0.84
TPM1-204ENST00000334895 AIFM1O95831 613 aa20.32■□□□□ 0.84
TPM1-204ENST00000334895 NTRK1P04629 796 aa20.32■□□□□ 0.84
TPM1-204ENST00000334895 FURINP09958 794 aa20.32■□□□□ 0.84
TPM1-204ENST00000334895 PIM1P11309 404 aaPredicted RBP20.32■□□□□ 0.84
TPM1-204ENST00000334895 PCSK2P16519 638 aa20.32■□□□□ 0.84
TPM1-204ENST00000334895 ZNF28P17035 718 aa20.32■□□□□ 0.84
TPM1-204ENST00000334895 OR1D4P47884 311 aa20.32■□□□□ 0.84
TPM1-204ENST00000334895 AVPR1BP47901 424 aa20.32■□□□□ 0.84
TPM1-204ENST00000334895 TARDBPQ13148 414 aaKnown RBP eCLIP20.32■□□□□ 0.84
TPM1-204ENST00000334895 PDE7AQ13946 482 aa20.32■□□□□ 0.84
TPM1-204ENST00000334895 RCAN2Q14206 197 aa20.32■□□□□ 0.84
TPM1-204ENST00000334895 SYT16Q17RD7 645 aa20.32■□□□□ 0.84
TPM1-204ENST00000334895 NDUFAF5Q5TEU4 345 aa20.32■□□□□ 0.84
TPM1-204ENST00000334895 C1orf189Q5VU69 101 aa20.32■□□□□ 0.84
TPM1-204ENST00000334895 ANKRD26P1Q6NSI1 321 aa20.32■□□□□ 0.84
TPM1-204ENST00000334895 BLOC1S3Q6QNY0 202 aa20.32■□□□□ 0.84
TPM1-204ENST00000334895 TMPRSS12Q86WS5 348 aa20.32■□□□□ 0.84
TPM1-204ENST00000334895 EFCAB3Q8N7B9 438 aa20.32■□□□□ 0.84
TPM1-204ENST00000334895 OR7A2PQ8NGA2 310 aa20.32■□□□□ 0.84
TPM1-204ENST00000334895 ADAMTS14Q8WXS8 1223 aa20.32■□□□□ 0.84
TPM1-204ENST00000334895 REEP4Q9H6H4 257 aa20.32■□□□□ 0.84
TPM1-204ENST00000334895 TMEM45AQ9NWC5 275 aa20.32■□□□□ 0.84
TPM1-204ENST00000334895 PISDQ9UG56 409 aa20.32■□□□□ 0.84
TPM1-204ENST00000334895 FAM234BA2RU67 622 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 WASHC1A8K0Z3 465 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 PLD2O14939 933 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 RRP9O43818 475 aaKnown RBP20.31■□□□□ 0.84
TPM1-204ENST00000334895 CAPN3P20807 821 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 POLR2JP52435 117 aaKnown RBP20.31■□□□□ 0.84
TPM1-204ENST00000334895 MAPK10P53779 464 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 EIF3IQ13347 325 aaKnown RBP20.31■□□□□ 0.84
TPM1-204ENST00000334895 KRT72Q14CN4 511 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 ZNF385BQ569K4 471 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 SPANXN4Q5MJ08 99 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 ZNF385CQ66K41 422 aaPredicted RBP20.31■□□□□ 0.84
TPM1-204ENST00000334895 NIPAL1Q6NVV3 410 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 POU5F2Q8N7G0 328 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 TESCQ96BS2 214 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 GBP5Q96PP8 586 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 ATP6V1HQ9UI12 483 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 PHF11Q9UIL8 331 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 B3GALT1Q9Y5Z6 326 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 GABRR3A8MPY1 467 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 NR5A2O00482 541 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 CYR61O00622 381 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 CBX6O95503 412 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 DDCP20711 480 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 RORAP35398 523 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 DGKQP52824 942 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 CLNS1AP54105 237 aaKnown RBP20.31■□□□□ 0.84
TPM1-204ENST00000334895 SKP1P63208 163 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 PHC1P78364 1004 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 SHC2P98077 582 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 TNFRSF17Q02223 184 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 FAM174BQ3ZCQ3 159 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 SNX32Q86XE0 403 aa20.31■□□□□ 0.84
TPM1-204ENST00000334895 GLB1L3Q8NCI6 653 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms