RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 C6orf141Q5SZD1 244 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 CMTM1Q8IZ96 169 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 SMPDL3AQ92484 453 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 NIPAL2Q9H841 368 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 UFSP2Q9NUQ7 469 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 TMEM63AO94886 807 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 HEXBP07686 556 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 CD3GP09693 182 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 OR12D2P58182 307 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 ZNF792Q3KQV3 632 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 EARS2Q5JPH6 523 aaKnown RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 FAM83HQ6ZRV2 1179 aaPredicted RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 SSX9Q7RTT3 188 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 PIGZQ86VD9 579 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 SPPL2BQ8TCT7 592 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 AUTS2Q8WXX7 1259 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 TMEM106CQ9BVX2 250 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 RSPH9Q9H1X1 276 aaPredicted RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 OR51I1Q9H343 314 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 TMEM181Q9P2C4 612 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 KLHL13Q9P2N7 655 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 MN1Q10571 1320 aaPredicted RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 TRAV6A0A075B6T7 132 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 CXCL11O14625 94 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 DIRAS3O95661 229 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 BCHEP06276 602 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 CSNK2A2P19784 350 aaPredicted RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 MSX2P35548 267 aaPredicted RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 GPR143P51810 404 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 AGAP7PQ5VUJ5 663 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 MRPL10Q7Z7H8 261 aaKnown RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 CPA6Q8N4T0 437 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 MAL2Q969L2 176 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 GSKIPQ9P0R6 139 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 CYP8B1Q9UNU6 501 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 LIPT1Q9Y234 373 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 ANKRD63C9JTQ0 380 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 MSCO60682 206 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 AKR1A1P14550 325 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 MAP2K4P45985 399 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 ARHGAP1Q07960 439 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 ZBTB46Q86UZ6 589 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 SLC43A2Q8N370 569 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 TMEM203Q969S6 136 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 NPLQ9BXD5 320 aaPredicted RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 PRRG4Q9BZD6 226 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 EBF1Q9UH73 591 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 EIF2B4Q9UI10 523 aaKnown RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 GPSM3Q9Y4H4 160 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 UNC119BA6NIH7 251 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 OR8U9P0C7N5 309 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 PTPN6P29350 595 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 ICAM3P32942 547 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 AFF3P51826 1226 aaKnown RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 NRG1Q02297 640 aaPredicted RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 DBPQ10586 325 aaPredicted RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 SNTB2Q13425 540 aaKnown RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 DECR1Q16698 335 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 PUS10Q3MIT2 529 aaKnown RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 SEZ6Q53EL9 994 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 CELF3Q5SZQ8 465 aaKnown RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 GPR135Q8IZ08 494 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 FCRL2Q96LA5 508 aaPredicted RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 PIGMQ9H3S5 423 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 TMEM131LA2VDJ0 1609 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 IL1AP01583 271 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 RFC2P35250 354 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 CDH8P55286 799 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 TAP2Q03519 686 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 NKX1-1Q15270 411 aaPredicted RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 LBHQ53QV2 105 aaPredicted RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 LIPJQ5W064 366 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 RPL22L1Q6P5R6 122 aaKnown RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 CD300LGQ6UXG3 332 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 SIAH1Q8IUQ4 282 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 C3orf58Q8NDZ4 430 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 GLYATL1Q969I3 302 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 CHRAC1Q9NRG0 131 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 RAI2Q9Y5P3 530 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 CCL15-CCL14A0A0B4J2E2 113 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 CASTOR2A6NHX0 329 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 MAFKO60675 156 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 HLA-HP01893 362 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 MYCLP1P12525 358 aaPredicted RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 CRYBB1P53674 252 aaPredicted RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 ZNF763Q0D2J5 394 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 NPRL3Q12980 569 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 CCL15Q16663 113 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 C4orf17Q53FE4 359 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 ZDHHC14Q8IZN3 488 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 OR56A3Q8NH54 315 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 SENP8Q96LD8 212 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 RANBP9Q96S59 729 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 ZNF559Q9BR84 538 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 SRA1Q9HD15 236 aaKnown RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 TMEM100Q9NV29 134 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 ASB6Q9NWX5 421 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 SMIM35A0A1B0GVV1 85 aa5.32□□□□□ -1.56
PTPRB-202ENST00000334414 HYKKA2RU49 373 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms